RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 A0A0B4J2C4 111 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 TMEM223A0PJW6 202 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 K7ERJ3 54 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 M0QXV9 152 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 CD28P10747 220 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 SCGB1A1P11684 91 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 LINC01547P58512 204 aaPredicted RBP3.78□□□□□ -1.8
CAPN3-217ENST00000567817 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
CAPN3-217ENST00000567817 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 C10orf126Q8N4M7 172 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 AMELXQ99217 191 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 TIMM21Q9BVV7 248 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
CAPN3-217ENST00000567817 TENM2Q9NT68 2774 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 IGHV1-58A0A0C4DH39 117 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 A0A0J9YXY3 114 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 TINCRA0A1B0GVN0 87 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 H3BMG7 143 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 IGHV3-53P01767 116 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 IGHV3-30P01768 117 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 IGHV3-30-5P0DP03 117 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 UBE2D3P61077 147 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 UBE2D2P62837 147 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 DEFB114Q30KQ6 69 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 MORN3Q6PF18 240 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-217ENST00000567817 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 TMEM61Q8N0U2 210 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 LINC01587Q99440 93 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
CAPN3-217ENST00000567817 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 K7EIL1 84 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 RS1O15537 224 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 TIMM17BO60830 172 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 P0DMU3 169 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 FAM231AP0DMU4 169 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 FAM231CP0DMU5 169 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 RPL39P62891 51 aaKnown RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 DAZ2Q13117 558 aaKnown RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 C10orf99Q6UWK7 81 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 DAZ4Q86SG3 579 aaKnown RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 STHQ8IWL8 128 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 KLHL30-AS1Q8NEE0 82 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 JPT2Q9H910 190 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 CSDC2Q9Y534 153 aaKnown RBP3.76□□□□□ -1.81
CAPN3-217ENST00000567817 SACSQ9NZJ4 4579 aa3.76□□□□□ -1.81
CAPN3-217ENST00000567817 KNCNA6PVL3 124 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 H7C423 109 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 SAP30O75446 220 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 TSPAN13O95857 204 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 COX6CP09669 75 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1A1P0DJD3 496 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1CP0DJD4 496 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 IFITM1P13164 125 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 HERVK_113P63121 156 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1FQ15415 496 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 DEFB121Q5J5C9 76 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 CFAP126Q5VTH2 177 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 Q75L30 129 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 C11orf72Q8NBR9 251 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 WFDC9Q8NEX5 89 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 TMEM263Q8WUH6 116 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 NAA38Q9BRA0 125 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 GEMIN7Q9H840 131 aaKnown RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 SPANXCQ9NY87 97 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 PRO0461Q9UI25 63 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 ERG28Q9UKR5 140 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 UBE2D4Q9Y2X8 147 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 TSSC4Q9Y5U2 329 aaPredicted RBP3.75□□□□□ -1.81
CAPN3-217ENST00000567817 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
CAPN3-217ENST00000567817 TRAV4A0A0B4J268 109 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 LOC107984156A0A0G2JMH3 177 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 TEX48A0A1B0GUV7 120 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1BA6NDE4 496 aaKnown RBP3.74□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1EA6NEQ0 496 aaKnown RBP3.74□□□□□ -1.81
CAPN3-217ENST00000567817 TMEM262E9PQX1 116 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 CCL24O00175 119 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 APOMO95445 188 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 RBMY1DP0C7P1 496 aaKnown RBP3.74□□□□□ -1.81
CAPN3-217ENST00000567817 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 ZFAND6Q6FIF0 208 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 FAM19A3Q7Z5A8 133 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 SBSPONQ8IVN8 264 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 ARL17AQ8IVW1 177 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 VSIG2Q96IQ7 327 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 LINC01600Q96MT4 127 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 SIGMAR1Q99720 223 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
CAPN3-217ENST00000567817 HERC2O95714 4834 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms