RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
CMTM3-214ENST00000567572 CFAP161Q6P656 301 aa12.6□□□□□ -0.39
CMTM3-214ENST00000567572 NTM-AS1Q6ZSK4 140 aa12.59□□□□□ -0.39
CMTM3-214ENST00000567572 PLAC8L1A1L4L8 177 aa12.58□□□□□ -0.39
CMTM3-214ENST00000567572 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.39
CMTM3-214ENST00000567572 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.39
CMTM3-214ENST00000567572 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.39
CMTM3-214ENST00000567572 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.39
CMTM3-214ENST00000567572 C9JAW5 83 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 TRIAP1O43715 76 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 LINC00694P0DN24 101 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 ANKRD29Q8N6D5 301 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
CMTM3-214ENST00000567572 SMIM1B2RUZ4 78 aa12.57□□□□□ -0.4
CMTM3-214ENST00000567572 H7C2G1 150 aa12.57□□□□□ -0.4
CMTM3-214ENST00000567572 HERV-K104P63124 156 aa12.57□□□□□ -0.4
CMTM3-214ENST00000567572 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
CMTM3-214ENST00000567572 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
CMTM3-214ENST00000567572 A8MZ25 164 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 COX6A2Q02221 97 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 GAGE12JA6NER3 117 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 UBE2L6O14933 153 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 GAGE4Q13068 117 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 GAGE5Q13069 117 aa12.56□□□□□ -0.4
CMTM3-214ENST00000567572 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
CMTM3-214ENST00000567572 TRBV10-2A0A0K0K1G8 114 aa12.55□□□□□ -0.4
CMTM3-214ENST00000567572 ATRQ13535 2644 aa12.55□□□□□ -0.4
CMTM3-214ENST00000567572 CDIP1Q9H305 208 aa12.54□□□□□ -0.4
CMTM3-214ENST00000567572 Q9H8V8 135 aa12.54□□□□□ -0.4
CMTM3-214ENST00000567572 F5H768 121 aa12.53□□□□□ -0.4
CMTM3-214ENST00000567572 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
CMTM3-214ENST00000567572 ZNF625Q96I27 306 aaPredicted RBP12.53□□□□□ -0.4
CMTM3-214ENST00000567572 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
CMTM3-214ENST00000567572 H3BT86 120 aa12.52□□□□□ -0.4
CMTM3-214ENST00000567572 LINC00308Q8TCZ7 52 aa12.52□□□□□ -0.4
CMTM3-214ENST00000567572 TRAV13-1A0A0B4J241 112 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 GAGE7O76087 117 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
CMTM3-214ENST00000567572 TRGV4A0A0C4DH28 118 aa12.5□□□□□ -0.41
CMTM3-214ENST00000567572 LST1O00453 97 aa12.5□□□□□ -0.41
CMTM3-214ENST00000567572 PRIMA1Q86XR5 153 aa12.49□□□□□ -0.41
CMTM3-214ENST00000567572 WIPF1O43516 503 aa12.49□□□□□ -0.41
CMTM3-214ENST00000567572 KRTAP24-1Q3LI83 254 aa12.49□□□□□ -0.41
CMTM3-214ENST00000567572 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
CMTM3-214ENST00000567572 NPC2P61916 151 aa12.47□□□□□ -0.41
CMTM3-214ENST00000567572 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
CMTM3-214ENST00000567572 FHL2Q14192 279 aa12.47□□□□□ -0.41
CMTM3-214ENST00000567572 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
CMTM3-214ENST00000567572 CYSRT1A8MQ03 144 aa12.46□□□□□ -0.42
CMTM3-214ENST00000567572 MEIG1Q5JSS6 88 aa12.46□□□□□ -0.42
CMTM3-214ENST00000567572 NOTCH3Q9UM47 2321 aa12.45□□□□□ -0.42
CMTM3-214ENST00000567572 DAND5Q8N907 189 aa12.45□□□□□ -0.42
CMTM3-214ENST00000567572 NTN5Q8WTR8 489 aaPredicted RBP12.45□□□□□ -0.42
CMTM3-214ENST00000567572 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
CMTM3-214ENST00000567572 C2orf82Q6UX34 121 aa12.45□□□□□ -0.42
CMTM3-214ENST00000567572 A0A1B0GV72 72 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 XGP55808 180 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 FAM222AQ5U5X8 452 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 LOC100131303A0A0U1RQF7 123 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 COX7A2LO14548 114 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 COX7B2Q8TF08 81 aa12.43□□□□□ -0.42
CMTM3-214ENST00000567572 X6R8D5 127 aa12.42□□□□□ -0.42
CMTM3-214ENST00000567572 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
CMTM3-214ENST00000567572 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
CMTM3-214ENST00000567572 MT-ATP8P03928 68 aa12.4□□□□□ -0.42
CMTM3-214ENST00000567572 GAGE6Q13070 117 aa12.4□□□□□ -0.42
CMTM3-214ENST00000567572 DEFB121Q5J5C9 76 aa12.4□□□□□ -0.42
CMTM3-214ENST00000567572 CLEC2BQ92478 149 aa12.4□□□□□ -0.42
CMTM3-214ENST00000567572 CHCHD5Q9BSY4 110 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 A0A087WZ39 114 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 FAM240AA0A1B0GVK7 77 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 APOC4P55056 127 aa12.39□□□□□ -0.43
CMTM3-214ENST00000567572 TRAV8-4A0A0B4J246 113 aa12.37□□□□□ -0.43
CMTM3-214ENST00000567572 TEX49A0A1B0GTD5 131 aa12.37□□□□□ -0.43
CMTM3-214ENST00000567572 TRACP01848 142 aa12.37□□□□□ -0.43
CMTM3-214ENST00000567572 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
CMTM3-214ENST00000567572 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
CMTM3-214ENST00000567572 A0A1B0GUV1 79 aa12.36□□□□□ -0.43
CMTM3-214ENST00000567572 IBA57-AS1B1ANH7 110 aa12.36□□□□□ -0.43
CMTM3-214ENST00000567572 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
CMTM3-214ENST00000567572 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
CMTM3-214ENST00000567572 A0A0U1RRA0 63 aa12.35□□□□□ -0.43
CMTM3-214ENST00000567572 LYRM9A8MSI8 78 aa12.35□□□□□ -0.43
CMTM3-214ENST00000567572 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
CMTM3-214ENST00000567572 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
CMTM3-214ENST00000567572 TRAV26-1A0A087WT03 109 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 CRPP02741 224 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 LINC00959A0A1B0GUT2 108 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms