RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TSKUQ8WUA8 353 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 SPANXDQ9BXN6 97 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 REG4Q9BYZ8 158 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 NDUFA12Q9UI09 145 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 PRO0461Q9UI25 63 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 FREM1Q5H8C1 2179 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 MUC4Q99102 2169 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 MYLKQ15746 1914 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 NINQ8N4C6 2090 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 RYR2Q92736 4967 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 DNAL4O96015 105 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 SLC25A6P12236 298 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 NPC2P61916 151 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 UBE2G1P62253 170 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 RHOHQ15669 191 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 LCE3EQ5T5B0 92 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 SPANXN1Q5VSR9 72 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 Q6AWC8 147 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 RPRMQ9NS64 109 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 KLK9Q9UKQ9 250 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 MGAM2Q2M2H8 2515 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 PTPRFP10586 1907 aa1.7□□□□□ -2.14
HERPUD1-211ENST00000566550 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 DCHS2Q6V1P9 2916 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 TMEM30CPA0ZSE6 113 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 FAM24AA6NFZ4 105 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 IGKV4-1P06312 121 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 KRTAP26-1Q6PEX3 210 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 BRD3OSQ6XYD6 125 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 SPTSSBQ8NFR3 76 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 LINC00526Q96FQ7 95 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 TMEM141Q96I45 108 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 DSCR8Q96T75 97 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 COL1A2P08123 1366 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 WNK1Q9H4A3 2382 aa1.69□□□□□ -2.14
HERPUD1-211ENST00000566550 SPAG17Q6Q759 2223 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 TRAV23DV6A0A075B6W5 121 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 TCRBV3S1A0A5B6 114 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 MPC2O95563 127 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 SNCAP37840 140 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 INSL4Q14641 139 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 C10orf55Q5SWW7 151 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 COL5A1-AS1Q5SY13 56 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 LYPD5Q6UWN5 251 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 C15orf53Q8NAA6 179 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 PATE1Q8WXA2 126 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 Q9H521 79 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 MYOFQ9NZM1 2061 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 CEP192Q8TEP8 1941 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 HERC2O95714 4834 aa1.68□□□□□ -2.14
HERPUD1-211ENST00000566550 MEGF8Q7Z7M0 2845 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.145e-7■■■□□ 19
HERPUD1-211ENST00000566550 PRRC2CQ9Y520 2896 aaKnown RBP1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 ANK2Q01484 3957 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 PPYP01298 95 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 GYPBP06028 91 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 WFDC10AQ9H1F0 79 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 PARP14Q460N5 1801 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 EML5Q05BV3 1969 aa1.67□□□□□ -2.14
HERPUD1-211ENST00000566550 DOCK10Q96BY6 2186 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 COL4A2P08572 1712 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 KIF20BQ96Q89 1820 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 CHD3Q12873 2000 aaKnown RBP1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 ACANP16112 2415 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 PIGBOS1A0A0B4J2F0 54 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 IGHV3-33P01772 117 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 PRB2P02812 416 aaPredicted RBP1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 CBLN1P23435 193 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 DEFB103AP81534 67 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 C9orf116Q5BN46 136 aaPredicted RBP1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 SLC48A1Q6P1K1 146 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 Q8N8P6 123 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 PPDPFLQ8WWR9 84 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 SNHG12Q9BXW3 62 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 MRPL35Q9NZE8 188 aaKnown RBP1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 DOCK1Q14185 1865 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 UNC13CQ8NB66 2214 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 PCNX2A6NKB5 2137 aa1.66□□□□□ -2.14
HERPUD1-211ENST00000566550 MYO7AQ13402 2215 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 TRAV2A0A0B4J234 112 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 J3QRE1 110 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 C12orf73Q69YU5 71 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 AQP10Q96PS8 301 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 ANK1P16157 1881 aa1.65□□□□□ -2.15
HERPUD1-211ENST00000566550 SDK1Q7Z5N4 2213 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 NSD1Q96L73 2696 aaPredicted RBP1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 MXRA5Q9NR99 2828 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 SONP18583 2426 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms