RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 A0A0B4J2C4 111 aa13.19□□□□□ -0.3
MSLN-207ENST00000566549 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
MSLN-207ENST00000566549 LYRM7Q5U5X0 104 aa13.18□□□□□ -0.3
MSLN-207ENST00000566549 SMCPP49901 116 aaPredicted RBP13.18□□□□□ -0.3
MSLN-207ENST00000566549 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
MSLN-207ENST00000566549 SPANXCQ9NY87 97 aa13.18□□□□□ -0.3
MSLN-207ENST00000566549 NDUFA1O15239 70 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 DEFB4AO15263 64 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 CHCHD5Q9BSY4 110 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 IGLV5-39A0A0G2JS06 123 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 INSL3P51460 131 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 X6R8D5 127 aa13.17□□□□□ -0.3
MSLN-207ENST00000566549 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 TRBV6-8A0A0A6YYG3 113 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 CIDEAO60543 219 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 DEFB135Q30KP9 77 aa13.15□□□□□ -0.3
MSLN-207ENST00000566549 FAM19A3Q7Z5A8 133 aa13.14□□□□□ -0.31
MSLN-207ENST00000566549 A0A096LPF7 62 aa13.14□□□□□ -0.31
MSLN-207ENST00000566549 F5H768 121 aa13.13□□□□□ -0.31
MSLN-207ENST00000566549 GYPEP15421 78 aa13.13□□□□□ -0.31
MSLN-207ENST00000566549 TRBV20-1A0A075B6N2 111 aa13.13□□□□□ -0.31
MSLN-207ENST00000566549 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
MSLN-207ENST00000566549 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
MSLN-207ENST00000566549 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
MSLN-207ENST00000566549 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
MSLN-207ENST00000566549 MEIG1Q5JSS6 88 aa13.11□□□□□ -0.31
MSLN-207ENST00000566549 TRIAP1O43715 76 aa13.1□□□□□ -0.31
MSLN-207ENST00000566549 TIMM17BO60830 172 aa13.1□□□□□ -0.31
MSLN-207ENST00000566549 TEP1Q99973 2627 aaKnown RBP13.1□□□□□ -0.31
MSLN-207ENST00000566549 H7C423 109 aa13.09□□□□□ -0.31
MSLN-207ENST00000566549 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
MSLN-207ENST00000566549 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
MSLN-207ENST00000566549 ATP6V0E2Q8NHE4 81 aa13.09□□□□□ -0.31
MSLN-207ENST00000566549 LINC00308Q8TCZ7 52 aa13.08□□□□□ -0.32
MSLN-207ENST00000566549 TMEM262E9PQX1 116 aa13.08□□□□□ -0.32
MSLN-207ENST00000566549 J3QR89 54 aa13.08□□□□□ -0.32
MSLN-207ENST00000566549 C9JAW5 83 aa13.07□□□□□ -0.32
MSLN-207ENST00000566549 CITED1Q99966 193 aa13.07□□□□□ -0.32
MSLN-207ENST00000566549 ICOSQ9Y6W8 199 aa13.07□□□□□ -0.32
MSLN-207ENST00000566549 IFITM1P13164 125 aa13.07□□□□□ -0.32
MSLN-207ENST00000566549 RPL13AP40429 203 aaKnown RBP13.07□□□□□ -0.32
MSLN-207ENST00000566549 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
MSLN-207ENST00000566549 FOXI1Q12951 378 aa13.05□□□□□ -0.32
MSLN-207ENST00000566549 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
MSLN-207ENST00000566549 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
MSLN-207ENST00000566549 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
MSLN-207ENST00000566549 IGHV4-28A0A0C4DH34 117 aa13.04□□□□□ -0.32
MSLN-207ENST00000566549 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
MSLN-207ENST00000566549 TRBV30A0A0K0K1B3 111 aa13.04□□□□□ -0.32
MSLN-207ENST00000566549 SLC25A20O43772 301 aa13.04□□□□□ -0.32
MSLN-207ENST00000566549 PAX4O43316 350 aa13.03□□□□□ -0.32
MSLN-207ENST00000566549 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
MSLN-207ENST00000566549 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
MSLN-207ENST00000566549 ANKRD29Q8N6D5 301 aa13.03□□□□□ -0.32
MSLN-207ENST00000566549 APOC4P55056 127 aa13.02□□□□□ -0.32
MSLN-207ENST00000566549 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
MSLN-207ENST00000566549 CLEC2BQ92478 149 aa13.02□□□□□ -0.33
MSLN-207ENST00000566549 IGHV3OR16-9A0A0B4J2B5 98 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 CELA1Q9UNI1 258 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 RNF183Q96D59 192 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 CARD19Q96LW7 228 aa13.01□□□□□ -0.33
MSLN-207ENST00000566549 XCL1P47992 114 aa13□□□□□ -0.33
MSLN-207ENST00000566549 HERV-K104P63124 156 aa13□□□□□ -0.33
MSLN-207ENST00000566549 LINC01620Q4KN68 170 aa13□□□□□ -0.33
MSLN-207ENST00000566549 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
MSLN-207ENST00000566549 LINC00959A0A1B0GUT2 108 aa13□□□□□ -0.33
MSLN-207ENST00000566549 DAD1P61803 113 aa13□□□□□ -0.33
MSLN-207ENST00000566549 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
MSLN-207ENST00000566549 COX6CP09669 75 aa12.98□□□□□ -0.33
MSLN-207ENST00000566549 HTN3P15516 51 aa12.98□□□□□ -0.33
MSLN-207ENST00000566549 Q8N3U1 123 aa12.98□□□□□ -0.33
MSLN-207ENST00000566549 PPDPFLQ8WWR9 84 aa12.98□□□□□ -0.33
MSLN-207ENST00000566549 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
MSLN-207ENST00000566549 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
MSLN-207ENST00000566549 F8P00451 2351 aa12.96□□□□□ -0.33
MSLN-207ENST00000566549 TRAV26-1A0A087WT03 109 aa12.96□□□□□ -0.33
MSLN-207ENST00000566549 A0A087WZ39 114 aa12.96□□□□□ -0.33
MSLN-207ENST00000566549 Q8NAQ8 132 aa12.96□□□□□ -0.33
MSLN-207ENST00000566549 LINC00158P58513 81 aa12.94□□□□□ -0.34
MSLN-207ENST00000566549 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
MSLN-207ENST00000566549 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
MSLN-207ENST00000566549 PFN2P35080 140 aa12.94□□□□□ -0.34
MSLN-207ENST00000566549 WFDC9Q8NEX5 89 aa12.93□□□□□ -0.34
MSLN-207ENST00000566549 NTN5Q8WTR8 489 aaPredicted RBP12.93□□□□□ -0.34
MSLN-207ENST00000566549 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
MSLN-207ENST00000566549 SS18Q15532 418 aa12.93□□□□□ -0.34
MSLN-207ENST00000566549 LINC00269Q8N2A0 174 aa12.93□□□□□ -0.34
MSLN-207ENST00000566549 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 IGLV10-54A0A075B6I4 117 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 ATP5G1P05496 136 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 MIFP14174 115 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
MSLN-207ENST00000566549 LST1O00453 97 aa12.91□□□□□ -0.34
MSLN-207ENST00000566549 C6orf226Q5I0X4 101 aa12.91□□□□□ -0.34
MSLN-207ENST00000566549 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms