RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 GHRHP01286 108 aa7.66□□□□□ -1.18
USB1-212ENST00000566082 CHCHD7Q9BUK0 85 aa7.66□□□□□ -1.18
USB1-212ENST00000566082 Q9UF83 564 aa7.66□□□□□ -1.18
USB1-212ENST00000566082 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
USB1-212ENST00000566082 PRB1P04280 392 aa7.65□□□□□ -1.18
USB1-212ENST00000566082 DSCR8Q96T75 97 aa7.65□□□□□ -1.18
USB1-212ENST00000566082 MUC4Q99102 2169 aa7.65□□□□□ -1.18
USB1-212ENST00000566082 DEFB114Q30KQ6 69 aa7.65□□□□□ -1.18
USB1-212ENST00000566082 F5H768 121 aa7.65□□□□□ -1.19
USB1-212ENST00000566082 C16orf74Q96GX8 76 aa7.65□□□□□ -1.19
USB1-212ENST00000566082 IMUPQ9GZP8 106 aa7.65□□□□□ -1.19
USB1-212ENST00000566082 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
USB1-212ENST00000566082 SBSPONQ8IVN8 264 aa7.64□□□□□ -1.19
USB1-212ENST00000566082 KALRNO60229 2985 aa7.64□□□□□ -1.19
USB1-212ENST00000566082 ZNF575Q86XF7 245 aa7.64□□□□□ -1.19
USB1-212ENST00000566082 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
USB1-212ENST00000566082 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
USB1-212ENST00000566082 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
USB1-212ENST00000566082 CENPEQ02224 2701 aa7.63□□□□□ -1.19
USB1-212ENST00000566082 SMIM11BQ8TCY0 68 aa7.63□□□□□ -1.19
USB1-212ENST00000566082 TRAV25A0A0B4J276 109 aa7.62□□□□□ -1.19
USB1-212ENST00000566082 TACC2O95359 2948 aa7.62□□□□□ -1.19
USB1-212ENST00000566082 JMJD7-PLA2G4BH0Y9G9 81 aa7.62□□□□□ -1.19
USB1-212ENST00000566082 DAD1P61803 113 aa7.62□□□□□ -1.19
USB1-212ENST00000566082 C4orf3Q8WVX3 66 aa7.62□□□□□ -1.19
USB1-212ENST00000566082 KLK5Q9Y337 293 aaPredicted RBP7.62□□□□□ -1.19
USB1-212ENST00000566082 M0QXV9 152 aa7.61□□□□□ -1.19
USB1-212ENST00000566082 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
USB1-212ENST00000566082 COX7CP15954 63 aa7.61□□□□□ -1.19
USB1-212ENST00000566082 A0A087WVE0 104 aa7.6□□□□□ -1.19
USB1-212ENST00000566082 DEFB4AO15263 64 aa7.6□□□□□ -1.19
USB1-212ENST00000566082 Q8N2B8 174 aa7.6□□□□□ -1.19
USB1-212ENST00000566082 CITED2Q99967 270 aaPredicted RBP7.6□□□□□ -1.19
USB1-212ENST00000566082 CDC42SE2Q9NRR3 84 aa7.6□□□□□ -1.19
USB1-212ENST00000566082 ANKRD17O75179 2603 aaKnown RBP7.6□□□□□ -1.19
USB1-212ENST00000566082 RBM3P98179 157 aaKnown RBP7.6□□□□□ -1.19
USB1-212ENST00000566082 ZNF702PQ9H963 129 aa7.6□□□□□ -1.19
USB1-212ENST00000566082 ACANP16112 2415 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 USP17L23D6RBM5 183 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 Q6YL49 198 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 WFDC10AQ9H1F0 79 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 AKAP13Q12802 2813 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 IBA57-AS1B1ANH7 110 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 ZNF561-AS1K7EIQ3 104 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 CCL18P55774 89 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 TMEM256-PLSCR3K7ERE1 68 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
USB1-212ENST00000566082 SHISA2Q6UWI4 295 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 ENHOQ6UWT2 76 aa7.59□□□□□ -1.19
USB1-212ENST00000566082 TRBV6-8A0A0A6YYG3 113 aa7.58□□□□□ -1.2
USB1-212ENST00000566082 FAM222AQ5U5X8 452 aa7.58□□□□□ -1.2
USB1-212ENST00000566082 WFDC9Q8NEX5 89 aa7.58□□□□□ -1.2
USB1-212ENST00000566082 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
USB1-212ENST00000566082 A0A087WYN8 130 aa7.57□□□□□ -1.2
USB1-212ENST00000566082 BRI3O95415 125 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 CXCL5P42830 114 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 ODF3L2Q3SX64 289 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 C6orf99Q4VX62 202 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 UPK3BQ9BT76 320 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 EPG5Q9HCE0 2579 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
USB1-212ENST00000566082 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
USB1-212ENST00000566082 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
USB1-212ENST00000566082 SPAG11BQ08648 103 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 DEFB113Q30KQ7 82 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 FAM110AQ9BQ89 295 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 DOPEY1Q5JWR5 2465 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 ZNF292O60281 2723 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 RPL28P46779 137 aaKnown RBP7.55□□□□□ -1.2
USB1-212ENST00000566082 LRRC75A-AS1Q8N1F1 130 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 LITAFQ99732 161 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
USB1-212ENST00000566082 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 LINC00526Q96FQ7 95 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 C1orf158Q8N1D5 194 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 IGHV4-31P0DP07 118 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 PRR3P79522 188 aaKnown RBP7.54□□□□□ -1.2
USB1-212ENST00000566082 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 DEFB105AQ8NG35 78 aa7.54□□□□□ -1.2
USB1-212ENST00000566082 PRO0255Q9UI72 69 aa7.53□□□□□ -1.2
USB1-212ENST00000566082 KLK12Q9UKR0 248 aa7.53□□□□□ -1.2
USB1-212ENST00000566082 DEFB135Q30KP9 77 aa7.53□□□□□ -1.2
USB1-212ENST00000566082 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.2
USB1-212ENST00000566082 DNAJC9-AS1A6NH13 148 aa7.52□□□□□ -1.2
USB1-212ENST00000566082 FAM218AQ96MZ4 157 aa7.52□□□□□ -1.2
USB1-212ENST00000566082 KLK9Q2XQG4 91 aa7.52□□□□□ -1.21
USB1-212ENST00000566082 LINC00846Q9NV44 126 aa7.52□□□□□ -1.21
USB1-212ENST00000566082 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
USB1-212ENST00000566082 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.21
USB1-212ENST00000566082 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
USB1-212ENST00000566082 TMEM258P61165 79 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 Q6JHZ5 121 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms