RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 DEFB135Q30KP9 77 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 LINC01554Q52M75 96 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 SPANXN5Q5MJ07 72 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 GDF5OSQ5U4N7 250 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 HACD4Q5VWC8 232 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 Q6Q795 121 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 LCA10Q71F78 164 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 LYG2Q86SG7 212 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 OR10J5Q8NHC4 309 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 USMG5Q96IX5 58 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 HIST1H2BLQ99880 126 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 RHPN1-AS1Q9BWJ2 59 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 CST11Q9H112 138 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 MIXL1Q9H2W2 232 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 NDUFA4L2Q9NRX3 87 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 SCN3BQ9NY72 215 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 COMMD3Q9UBI1 195 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 SMPXQ9UHP9 88 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 KLK9Q9UKQ9 250 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 TPRKBQ9Y3C4 175 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 PDCD5O14737 125 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 PPYP01298 95 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 APOA2P02652 100 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 CD3DP04234 171 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 PIGPP57054 158 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 HSPE1P61604 102 aaKnown RBP0.89□□□□□ -2.27
PALB2-203ENST00000565038 NCS1P62166 190 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 HAMPP81172 84 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 NEDD8Q15843 81 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 VMA21Q3ZAQ7 101 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 Q56UQ5 140 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 IZUMO2Q6UXV1 221 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 GOLT1AQ6ZVE7 132 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 SNX29P2Q8IUI4 249 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 DYNLRB2Q8TF09 96 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 ISOC1Q96CN7 298 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 C2orf50Q96LR7 162 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 LINC00052Q96N35 136 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 TP53RKQ96S44 253 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 FXYD6Q9H0Q3 95 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 SSR3Q9UNL2 185 aa0.89□□□□□ -2.27
PALB2-203ENST00000565038 SSPOA2VEC9 5147 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 TRBV7-1A0A0A6YYK4 115 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 TRAV5A0A0B4J249 113 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 FAM223BA6NKX1 122 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 H3BUA1 57 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 GPR31O00270 319 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 NDUFA4O00483 81 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 SNAPC5O75971 98 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 SMR3BP02814 79 aaPredicted RBP0.88□□□□□ -2.27
PALB2-203ENST00000565038 HTN3P15516 51 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 ATP5G3P48201 142 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 GNG2P59768 71 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 ARPC4P59998 168 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 SPCS2Q15005 226 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 RTL8BQ17RB0 113 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 ESRGQ1W209 222 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 PSMG4Q5JS54 123 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 PATE2Q6UY27 113 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 FAM223AQ8IWN6 122 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 C12orf45Q8N5I9 185 aaPredicted RBP0.88□□□□□ -2.27
PALB2-203ENST00000565038 TCTEX1D1Q8N7M0 179 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.88□□□□□ -2.27
PALB2-203ENST00000565038 S100A16Q96FQ6 103 aaKnown RBP0.88□□□□□ -2.27
PALB2-203ENST00000565038 C6orf62Q9GZU0 229 aaPredicted RBP0.88□□□□□ -2.27
PALB2-203ENST00000565038 SLC35B3Q9H1N7 401 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 BET1LQ9NYM9 111 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 RABAC1Q9UI14 185 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 EPDR1Q9UM22 224 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 UFC1Q9Y3C8 167 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 SNURFQ9Y675 71 aa0.88□□□□□ -2.27
PALB2-203ENST00000565038 USH2AO75445 5202 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 TRAV12-2A0A075B6T6 113 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 DEFB131BA0A096LNP1 70 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 A0A096LPF7 62 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 TRAV4A0A0B4J268 109 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 A0A0J9YY99 117 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 FAM25AB3EWG3 89 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 FAM25CB3EWG5 89 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 FAM25GB3EWG6 89 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 GNG7O60262 68 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 MRPS14O60783 128 aaKnown RBP0.87□□□□□ -2.27
PALB2-203ENST00000565038 ATG12O94817 140 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 IFNA7P01567 189 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 IFNA17P01571 189 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 IFNA4P05014 189 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 IGLC1P0CG04 106 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 DEFB130BP0DP73 79 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 DEFB130AP0DP74 79 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 IAPPP10997 89 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 HTN1P15515 57 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 HIST1H1BP16401 226 aaKnown RBP0.87□□□□□ -2.27
PALB2-203ENST00000565038 CTAG1AP78358 180 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 PRCDQ00LT1 54 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 SCGB2B2Q4G0G5 96 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 TMEM229BQ8NBD8 167 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 OR4B1Q8NGF8 309 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 PRADC1Q9BSG0 188 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 PBDC1Q9BVG4 233 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms