RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 LELP1Q5T871 98 aa17.4■□□□□ 0.38
LINC01003-201ENST00000564834 C11orf45Q8TAV5 145 aa17.4■□□□□ 0.38
LINC01003-201ENST00000564834 SPANXB1Q9NS25 103 aaPredicted RBP17.39■□□□□ 0.37
LINC01003-201ENST00000564834 PTTG1IPP53801 180 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 COX11Q9Y6N1 276 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 IGKV3OR2-268A0A0C4DH90 116 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 SMIM1B2RUZ4 78 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 ZFAND6Q6FIF0 208 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 C10orf126Q8N4M7 172 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 NDUFA12Q9UI09 145 aa17.38■□□□□ 0.37
LINC01003-201ENST00000564834 K7EP13 123 aa17.37■□□□□ 0.37
LINC01003-201ENST00000564834 SRSF9Q13242 221 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC01003-201ENST00000564834 NANOS2P60321 138 aaKnown RBP17.36■□□□□ 0.37
LINC01003-201ENST00000564834 MRAPQ8TCY5 172 aa17.36■□□□□ 0.37
LINC01003-201ENST00000564834 KRTAP21-3Q3LHN1 58 aa17.35■□□□□ 0.37
LINC01003-201ENST00000564834 Q6ZVH6 145 aa17.35■□□□□ 0.37
LINC01003-201ENST00000564834 LINC00959A0A1B0GUT2 108 aa17.35■□□□□ 0.37
LINC01003-201ENST00000564834 A0A0J9YXY3 114 aa17.34■□□□□ 0.37
LINC01003-201ENST00000564834 LYPD5Q6UWN5 251 aa17.33■□□□□ 0.36
LINC01003-201ENST00000564834 DEFB131BA0A096LNP1 70 aa17.32■□□□□ 0.36
LINC01003-201ENST00000564834 IGHV3OR16-9A0A0B4J2B5 98 aa17.32■□□□□ 0.36
LINC01003-201ENST00000564834 TMEM238C9JI98 176 aa17.31■□□□□ 0.36
LINC01003-201ENST00000564834 CCL25O15444 150 aa17.31■□□□□ 0.36
LINC01003-201ENST00000564834 SMIM13P0DJ93 91 aa17.31■□□□□ 0.36
LINC01003-201ENST00000564834 NHP2Q9NX24 153 aaKnown RBP17.31■□□□□ 0.36
LINC01003-201ENST00000564834 NDUFA1O15239 70 aa17.3■□□□□ 0.36
LINC01003-201ENST00000564834 SS18Q15532 418 aa17.3■□□□□ 0.36
LINC01003-201ENST00000564834 IGHV3-30P01768 117 aa17.3■□□□□ 0.36
LINC01003-201ENST00000564834 IGHV3-30-5P0DP03 117 aa17.3■□□□□ 0.36
LINC01003-201ENST00000564834 TMEM238LA0A1B0GVL6 79 aa17.29■□□□□ 0.36
LINC01003-201ENST00000564834 A6NJY4 79 aa17.29■□□□□ 0.36
LINC01003-201ENST00000564834 ANGP03950 147 aaKnown RBP17.28■□□□□ 0.36
LINC01003-201ENST00000564834 LINC00269Q8N2A0 174 aa17.28■□□□□ 0.36
LINC01003-201ENST00000564834 HUWE1Q7Z6Z7 4374 aaKnown RBP17.28■□□□□ 0.36
LINC01003-201ENST00000564834 A0A087WZ39 114 aa17.28■□□□□ 0.36
LINC01003-201ENST00000564834 CLPSL2Q6UWE3 100 aa17.28■□□□□ 0.36
LINC01003-201ENST00000564834 Q8N3U1 123 aa17.28■□□□□ 0.36
LINC01003-201ENST00000564834 LITAFQ99732 161 aa17.26■□□□□ 0.35
LINC01003-201ENST00000564834 A0A1B0GWB2 263 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 C9orf118A6NHY6 69 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 REG3AQ06141 175 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 Q9H8V8 135 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 K7ERJ3 54 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 RAB37Q96AX2 223 aa17.25■□□□□ 0.35
LINC01003-201ENST00000564834 DNHD1Q96M86 4753 aa17.24■□□□□ 0.35
LINC01003-201ENST00000564834 TRAV10A0A0B4J240 114 aa17.23■□□□□ 0.35
LINC01003-201ENST00000564834 TIMM17BO60830 172 aa17.23■□□□□ 0.35
LINC01003-201ENST00000564834 XCL1P47992 114 aa17.23■□□□□ 0.35
LINC01003-201ENST00000564834 ZNF625Q96I27 306 aaPredicted RBP17.23■□□□□ 0.35
LINC01003-201ENST00000564834 C5orf38Q86SI9 138 aa17.22■□□□□ 0.35
LINC01003-201ENST00000564834 SPANXDQ9BXN6 97 aa17.22■□□□□ 0.35
LINC01003-201ENST00000564834 SPANXCQ9NY87 97 aa17.22■□□□□ 0.35
LINC01003-201ENST00000564834 COX7B2Q8TF08 81 aa17.21■□□□□ 0.35
LINC01003-201ENST00000564834 HERV-K104P63124 156 aa17.2■□□□□ 0.34
LINC01003-201ENST00000564834 LINC01561Q8N1V8 128 aa17.2■□□□□ 0.34
LINC01003-201ENST00000564834 ADAMTSL4-AS1Q5T5F5 129 aa17.19■□□□□ 0.34
LINC01003-201ENST00000564834 CD164L2Q6UWJ8 174 aa17.19■□□□□ 0.34
LINC01003-201ENST00000564834 H3BUT2 72 aa17.18■□□□□ 0.34
LINC01003-201ENST00000564834 RPL24P83731 157 aaKnown RBP17.18■□□□□ 0.34
LINC01003-201ENST00000564834 CIRBPQ14011 172 aaKnown RBP17.18■□□□□ 0.34
LINC01003-201ENST00000564834 VAMP3Q15836 100 aa17.18■□□□□ 0.34
LINC01003-201ENST00000564834 CHCHD10Q8WYQ3 142 aaPredicted RBP17.18■□□□□ 0.34
LINC01003-201ENST00000564834 PRR34Q9NV39 138 aa17.18■□□□□ 0.34
LINC01003-201ENST00000564834 MIAQ16674 131 aa17.17■□□□□ 0.34
LINC01003-201ENST00000564834 ESRGQ1W209 222 aa17.17■□□□□ 0.34
LINC01003-201ENST00000564834 MUSTN1Q8IVN3 82 aa17.17■□□□□ 0.34
LINC01003-201ENST00000564834 TOMM7Q9P0U1 55 aa17.17■□□□□ 0.34
LINC01003-201ENST00000564834 WFDC10BQ8IUB3 73 aa17.16■□□□□ 0.34
LINC01003-201ENST00000564834 C15orf53Q8NAA6 179 aa17.16■□□□□ 0.34
LINC01003-201ENST00000564834 KLK12Q9UKR0 248 aa17.16■□□□□ 0.34
LINC01003-201ENST00000564834 NAA38Q9BRA0 125 aaKnown RBP17.15■□□□□ 0.34
LINC01003-201ENST00000564834 IGLV10-54A0A075B6I4 117 aa17.14■□□□□ 0.33
LINC01003-201ENST00000564834 B9D2Q9BPU9 175 aa17.14■□□□□ 0.33
LINC01003-201ENST00000564834 A4D1N5 150 aa17.13■□□□□ 0.33
LINC01003-201ENST00000564834 IGHV3-33P01772 117 aa17.13■□□□□ 0.33
LINC01003-201ENST00000564834 PRSS2P07478 247 aa17.13■□□□□ 0.33
LINC01003-201ENST00000564834 COX7A2LO14548 114 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 APOMO95445 188 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 CFC1BP0CG36 223 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 CFC1P0CG37 223 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 A0A1W2PPM0 123 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 IGLL5B9A064 214 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 IFITM1P13164 125 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 UBE2V1Q13404 147 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 MEIG1Q5JSS6 88 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 SFTA2Q6UW10 78 aa17.12■□□□□ 0.33
LINC01003-201ENST00000564834 ENHOQ6UWT2 76 aa17.11■□□□□ 0.33
LINC01003-201ENST00000564834 DNAH9Q9NYC9 4486 aa17.1■□□□□ 0.33
LINC01003-201ENST00000564834 Q8IZM0 81 aa17.1■□□□□ 0.33
LINC01003-201ENST00000564834 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.1■□□□□ 0.33
LINC01003-201ENST00000564834 CRPP02741 224 aa17.1■□□□□ 0.33
LINC01003-201ENST00000564834 COL7A1Q02388 2944 aa17.09■□□□□ 0.33
LINC01003-201ENST00000564834 FOXI1Q12951 378 aa17.09■□□□□ 0.33
LINC01003-201ENST00000564834 DAND5Q8N907 189 aa17.08■□□□□ 0.33
LINC01003-201ENST00000564834 TRAV8-4A0A0B4J246 113 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 A0A0B4J2C4 111 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 FABP2P12104 132 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 C6orf226Q5I0X4 101 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 PGPEP1Q9NXJ5 209 aa17.07■□□□□ 0.32
LINC01003-201ENST00000564834 STAB2Q8WWQ8 2551 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms