RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 Q8N976 141 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 VCX2Q9H322 139 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 CST9LQ9H4G1 147 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
GINS3-205ENST00000564814 HERC1Q15751 4861 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 LINC00959A0A1B0GUT2 108 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 PRSS29PA6NIE9 313 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 TMEM262E9PQX1 116 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 F8VRH5 84 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 ANGP03950 147 aaKnown RBP5.04□□□□□ -1.6
GINS3-205ENST00000564814 IGLC3P0DOY3 106 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 HNRNPA3P51991 378 aaKnown RBP5.04□□□□□ -1.6
GINS3-205ENST00000564814 ENHOQ6UWT2 76 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 UBE2DNLQ8IWF7 75 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 DEFB104AQ8WTQ1 72 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 COX11Q9Y6N1 276 aa5.04□□□□□ -1.6
GINS3-205ENST00000564814 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 IGLV4-69A0A075B6H9 119 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 IGHV3OR16-9A0A0B4J2B5 98 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 NBDYA0A0U1RRE5 68 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 HERVK_113P63121 156 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 KLK12Q9UKR0 248 aa5.03□□□□□ -1.6
GINS3-205ENST00000564814 CRPP02741 224 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 PRSS1P07477 247 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 PLNP26678 52 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 SS18Q15532 418 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 CD164L2Q6UWJ8 174 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 LINC00269Q8N2A0 174 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 Q8N3U1 123 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
GINS3-205ENST00000564814 KRTAP1-5Q9BYS1 174 aa5.02□□□□□ -1.61
GINS3-205ENST00000564814 DNAH10Q8IVF4 4471 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 A0A1B0GV90 55 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 LY6G6CO95867 125 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 IGHV3-30P01768 117 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 IGHV3-33P01772 117 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 IGHV3-30-3P0DP02 117 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 IGHV3-30-5P0DP03 117 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 RMI2Q96E14 147 aa5.01□□□□□ -1.61
GINS3-205ENST00000564814 MRPL35Q9NZE8 188 aaKnown RBP5.01□□□□□ -1.61
GINS3-205ENST00000564814 CHTOPQ9Y3Y2 248 aaKnown RBP5.01□□□□□ -1.61
GINS3-205ENST00000564814 A0A087WZ39 114 aa5□□□□□ -1.61
GINS3-205ENST00000564814 C11orf86A6NJI1 115 aa5□□□□□ -1.61
GINS3-205ENST00000564814 EREGO14944 169 aa5□□□□□ -1.61
GINS3-205ENST00000564814 DPM2O94777 84 aa5□□□□□ -1.61
GINS3-205ENST00000564814 BATFQ16520 125 aa5□□□□□ -1.61
GINS3-205ENST00000564814 COL5A1-AS1Q5SY13 56 aa5□□□□□ -1.61
GINS3-205ENST00000564814 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
GINS3-205ENST00000564814 ATOH7Q8N100 152 aa5□□□□□ -1.61
GINS3-205ENST00000564814 UBE2WQ96B02 151 aa5□□□□□ -1.61
GINS3-205ENST00000564814 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
GINS3-205ENST00000564814 C1orf43Q9BWL3 253 aa5□□□□□ -1.61
GINS3-205ENST00000564814 TM2D2Q9BX73 214 aa5□□□□□ -1.61
GINS3-205ENST00000564814 SNHG12Q9BXW3 62 aa5□□□□□ -1.61
GINS3-205ENST00000564814 TRAV13-1A0A0B4J241 112 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 H0Y8G0 127 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 IGKCP01834 107 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 ZNF22P17026 224 aaPredicted RBP4.99□□□□□ -1.61
GINS3-205ENST00000564814 FOXI1Q12951 378 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 RNASE13Q5GAN3 156 aaKnown RBP4.99□□□□□ -1.61
GINS3-205ENST00000564814 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 CHCHD10Q8WYQ3 142 aaPredicted RBP4.99□□□□□ -1.61
GINS3-205ENST00000564814 CHAC1Q9BUX1 264 aa4.99□□□□□ -1.61
GINS3-205ENST00000564814 DNAH6Q9C0G6 4158 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 A0A0J9YXV3 536 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 F8WDY8 70 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 ZC2HC1BQ5TFG8 222 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 SLC25A34Q6PIV7 304 aa4.98□□□□□ -1.61
GINS3-205ENST00000564814 GEMIN7Q9H840 131 aaKnown RBP4.98□□□□□ -1.61
GINS3-205ENST00000564814 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 H3BRM9 83 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 COX6A2Q02221 97 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
GINS3-205ENST00000564814 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 GVQW2A0A096LPI5 108 aaPredicted RBP4.96□□□□□ -1.62
GINS3-205ENST00000564814 IGHV1-58A0A0C4DH39 117 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 hDV102S1A0JD36 115 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 SMIM1B2RUZ4 78 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 E9PLD3 99 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 COX7A2LO14548 114 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 APOMO95445 188 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 CLPSL2Q6UWE3 100 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 Q8IZM0 81 aa4.96□□□□□ -1.62
GINS3-205ENST00000564814 IGKV2D-24A0A075B6R9 120 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 CXCL5P42830 114 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 XCL1P47992 114 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 HERVK_113P61574 105 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 MAJINQ3KP22 176 aa4.95□□□□□ -1.62
GINS3-205ENST00000564814 C1orf134Q5TEV5 83 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms