RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ANKRD17O75179 2603 aaKnown RBP0.99□□□□□ -2.25
CHD9-209ENST00000564255 ABCA2Q9BZC7 2435 aa0.99□□□□□ -2.25
CHD9-209ENST00000564255 USP9XQ93008 2570 aaPredicted RBP0.99□□□□□ -2.25
CHD9-209ENST00000564255 TRAV13-2A0A0B4J235 113 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 TCRBV4S1A1TA0A5B7 111 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 GNGT1P63211 74 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 MIR22HGQ0VDD5 57 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 WFDC2Q14508 124 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 MPV17LQ2QL34 196 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 SPATA45Q537H7 98 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 NMSQ5H8A3 153 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 KRTAP26-1Q6PEX3 210 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 LYPD5Q6UWN5 251 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 CYP4F30PQ9H0H9 118 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 CDC42SE1Q9NRR8 79 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 SIPA1L3O60292 1781 aaPredicted RBP0.98□□□□□ -2.25
CHD9-209ENST00000564255 UTRNP46939 3433 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 SPTBN4Q9H254 2564 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 TRBV7-1A0A0A6YYK4 115 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 TRAV12-1A0A0B4J245 112 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 H7BZZ5 65 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 CXCL8P10145 99 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 RNASE3P12724 160 aaKnown RBP0.98□□□□□ -2.25
CHD9-209ENST00000564255 CR1P17927 2039 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
CHD9-209ENST00000564255 NXT2Q9NPJ8 142 aaKnown RBP0.98□□□□□ -2.25
CHD9-209ENST00000564255 KIAA1109Q2LD37 5005 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 TRAV10A0A0B4J240 114 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 CXorf51AA0A1B0GTR3 108 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 KANTRA0A1W2PQU2 76 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 A6NIN4 97 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 HCG22E2RYF7 251 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 H3BUT2 72 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 DEFB113Q30KQ7 82 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 RPL7L1Q6DKI1 246 aaKnown RBP0.98□□□□□ -2.25
CHD9-209ENST00000564255 ZNF833PQ6ZTB9 187 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 DEFB124Q8NES8 71 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 SPTSSBQ8NFR3 76 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 ZNF563Q8TA94 476 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 Q8TAT8 98 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 C18orf32Q8TCD1 76 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 ODF3Q96PU9 254 aa0.98□□□□□ -2.25
CHD9-209ENST00000564255 RYR1P21817 5038 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 NUMA1Q14980 2115 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 A0A087WWC5 75 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 C2orf70A6NJV1 201 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 F2Z2F3 143 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 PRB4P10163 310 aaPredicted RBP0.97□□□□□ -2.25
CHD9-209ENST00000564255 UBE2D3P61077 147 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 SNRPFP62306 86 aaKnown RBP0.97□□□□□ -2.25
CHD9-209ENST00000564255 UBE2D2P62837 147 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 PMCHL1Q16048 86 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 CFAP126Q5VTH2 177 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 C2orf82Q6UX34 121 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 CYP2G1PQ6ZSU1 146 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 NDUFA11Q86Y39 141 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 FAM167A-AS1Q96KT0 104 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 HIGD1BQ9P298 99 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 C22orf24Q9Y442 160 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 SCN3AQ9NY46 2000 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 DOPEY1Q5JWR5 2465 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 MYO18AQ92614 2054 aaKnown RBP0.97□□□□□ -2.25
CHD9-209ENST00000564255 VMO1Q7Z5L0 202 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 CEP250Q9BV73 2442 aa0.97□□□□□ -2.25
CHD9-209ENST00000564255 MUC4Q99102 2169 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 SSPOA2VEC9 5147 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 BCE1O60756 84 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 SIX6O95475 246 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 EFNA4P52798 201 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 UNQ6190/PRO20217Q6UXQ8 127 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 SETXQ7Z333 2677 aaKnown RBP0.96□□□□□ -2.26
CHD9-209ENST00000564255 GCN1Q92616 2671 aaKnown RBP0.96□□□□□ -2.26
CHD9-209ENST00000564255 TNRC6BQ9UPQ9 1833 aaKnown RBP0.96□□□□□ -2.26
CHD9-209ENST00000564255 EXPH5Q8NEV8 1989 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 SPTA1P02549 2419 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 ACYP1P07311 99 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 PRO1854Q9UHT4 67 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 ANKRD11Q6UB99 2663 aaPredicted RBP0.96□□□□□ -2.26
CHD9-209ENST00000564255 ZNF292O60281 2723 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 MYO9AB2RTY4 2548 aa0.96□□□□□ -2.26
CHD9-209ENST00000564255 SPTBN5Q9NRC6 3674 aaKnown RBP0.96□□□□□ -2.26
CHD9-209ENST00000564255 EP300Q09472 2414 aaPredicted RBP0.95□□□□□ -2.26
CHD9-209ENST00000564255 TRAV23DV6A0A075B6W5 121 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 TRAV12-3A0A0B4J271 114 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 TRAV22A0A0B4J277 110 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 C7orf77A4D0Y5 90 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 IGHV3-33P01772 117 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 UBE2D1P51668 147 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 Q5VV11 94 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 Q8N6K4 173 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 MANBALQ9NQG1 85 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 PCNX1Q96RV3 2341 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 COL6A3P12111 3177 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 LAMA4Q16363 1823 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 MYO18BQ8IUG5 2567 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 HELZ2Q9BYK8 2649 aaKnown RBP0.95□□□□□ -2.26
CHD9-209ENST00000564255 TRBV7-3A0A075B6L6 115 aa0.95□□□□□ -2.26
CHD9-209ENST00000564255 A0A0G2JND7 137 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms