RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
SMG1-209ENST00000563836 TRAV9-2A0A087WT02 112 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 IGLL5B9A064 214 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 H3BRM9 83 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 CCL25O15444 150 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 CRPP02741 224 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 TCTAP57738 103 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 SS18Q15532 418 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 LINC00173Q6ZV60 143 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 Q9UF83 564 aa5.67□□□□□ -1.5
SMG1-209ENST00000563836 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 A0A1B0GUV1 79 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 HERVK_113P63121 156 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 VAMP3Q15836 100 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 TMEM170BQ5T4T1 132 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 UBE2DNLQ8IWF7 75 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
SMG1-209ENST00000563836 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
SMG1-209ENST00000563836 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
SMG1-209ENST00000563836 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
SMG1-209ENST00000563836 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
SMG1-209ENST00000563836 MRPL35Q9NZE8 188 aaKnown RBP5.65□□□□□ -1.5
SMG1-209ENST00000563836 TRAV13-1A0A0B4J241 112 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 Q6ZUT4 128 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 AMELXQ99217 191 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 PMCHL2Q9BQD1 86 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 CDC42SE2Q9NRR3 84 aa5.64□□□□□ -1.51
SMG1-209ENST00000563836 MGAM2Q2M2H8 2515 aa5.63□□□□□ -1.51
SMG1-209ENST00000563836 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
SMG1-209ENST00000563836 RBX1P62877 108 aa5.63□□□□□ -1.51
SMG1-209ENST00000563836 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
SMG1-209ENST00000563836 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
SMG1-209ENST00000563836 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
SMG1-209ENST00000563836 NMUP48645 174 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
SMG1-209ENST00000563836 C10orf126Q8N4M7 172 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 RMI2Q96E14 147 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
SMG1-209ENST00000563836 UQCR10Q9UDW1 63 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 ANK2Q01484 3957 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
SMG1-209ENST00000563836 NOTCH1P46531 2555 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 hDV102S1A0JD36 115 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 SIVA1O15304 175 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 IGHV3-30P01768 117 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 IGHV3-33P01772 117 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 IGHV3-30-3P0DP02 117 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 IGHV3-30-5P0DP03 117 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 UBE2D1P51668 147 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 REG3AQ06141 175 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 NFE4Q86UQ8 179 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
SMG1-209ENST00000563836 MRPS16Q9Y3D3 137 aaKnown RBP5.61□□□□□ -1.51
SMG1-209ENST00000563836 TRAV8-4A0A0B4J246 113 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 K7EP13 123 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 APOMO95445 188 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 ESRGQ1W209 222 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 SLC25A34Q6PIV7 304 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 LINC00269Q8N2A0 174 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 STPG4Q8N801 248 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 Q8N976 141 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 KLK12Q9UKR0 248 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 NBEAL2Q6ZNJ1 2754 aa5.6□□□□□ -1.51
SMG1-209ENST00000563836 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 TMEM238C9JI98 176 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 E9PLD3 99 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
SMG1-209ENST00000563836 MIAQ16674 131 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 LINC01556Q5JQF7 62 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 SCGB1D4Q6XE38 83 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 PRO1933Q9H354 126 aa5.59□□□□□ -1.51
SMG1-209ENST00000563836 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 LINC00959A0A1B0GUT2 108 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 LEPROTO15243 131 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
SMG1-209ENST00000563836 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 FAM19A3Q7Z5A8 133 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
SMG1-209ENST00000563836 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 COX7A2LO14548 114 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 COX8AP10176 69 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 XCL1P47992 114 aa5.57□□□□□ -1.52
SMG1-209ENST00000563836 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms