RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 J3QQQ9 107 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 SPCS1Q9Y6A9 102 aa10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
SCAMP2-203ENST00000563663 DEFB104AQ8WTQ1 72 aa10.16□□□□□ -0.78
SCAMP2-203ENST00000563663 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
SCAMP2-203ENST00000563663 ZNF22P17026 224 aaPredicted RBP10.16□□□□□ -0.78
SCAMP2-203ENST00000563663 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCAMP2-203ENST00000563663 TRGV4A0A0C4DH28 118 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 PAX4O43316 350 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 LGALS3P17931 250 aaKnown RBP10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 UBE2D1P51668 147 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 COTL1Q14019 142 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 Q9UF83 564 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 UBE2D4Q9Y2X8 147 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 CBY1Q9Y3M2 126 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
SCAMP2-203ENST00000563663 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 K7EQD1 137 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 ESRGQ1W209 222 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 K7ERJ3 54 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 OCIAD2Q56VL3 154 aa10.14□□□□□ -0.79
SCAMP2-203ENST00000563663 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
SCAMP2-203ENST00000563663 TSPEAR-AS2P59090 65 aa10.13□□□□□ -0.79
SCAMP2-203ENST00000563663 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
SCAMP2-203ENST00000563663 NAA38Q9BRA0 125 aaKnown RBP10.12□□□□□ -0.79
SCAMP2-203ENST00000563663 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
SCAMP2-203ENST00000563663 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
SCAMP2-203ENST00000563663 HECTD4Q9Y4D8 3996 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 IGHV3-30P01768 117 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 IGHV3-30-5P0DP03 117 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 GYPEP15421 78 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 RBX1P62877 108 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 ICOSQ9Y6W8 199 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 K7ERU9 68 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 TIRAPP58753 221 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
SCAMP2-203ENST00000563663 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
SCAMP2-203ENST00000563663 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
SCAMP2-203ENST00000563663 DNAH11Q96DT5 4516 aa10.1□□□□□ -0.79
SCAMP2-203ENST00000563663 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 F8W1H4 67 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 Q6ZR54 194 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 IGLV5-45A0A087WSX0 123 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 LYPD5Q6UWN5 251 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 GTSF1LQ9H1H1 148 aa10.09□□□□□ -0.79
SCAMP2-203ENST00000563663 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
SCAMP2-203ENST00000563663 CCL18P55774 89 aa10.08□□□□□ -0.8
SCAMP2-203ENST00000563663 PKD1P98161 4303 aa10.08□□□□□ -0.8
SCAMP2-203ENST00000563663 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 UBE2D3P61077 147 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 UBE2D2P62837 147 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 KRTAP1-5Q9BYS1 174 aa10.07□□□□□ -0.8
SCAMP2-203ENST00000563663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 H7C423 109 aa10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 DGAT2L7PQ6IED9 249 aa10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SCAMP2-203ENST00000563663 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
SCAMP2-203ENST00000563663 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
SCAMP2-203ENST00000563663 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
SCAMP2-203ENST00000563663 Q6ZUT4 128 aa10.05□□□□□ -0.8
SCAMP2-203ENST00000563663 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
SCAMP2-203ENST00000563663 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
SCAMP2-203ENST00000563663 CFC1P0CG37 223 aa10.04□□□□□ -0.8
SCAMP2-203ENST00000563663 C10orf126Q8N4M7 172 aa10.04□□□□□ -0.8
SCAMP2-203ENST00000563663 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 HERVK_113P63121 156 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 TIMM17BO60830 172 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 GAGE4Q13068 117 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 GAGE5Q13069 117 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 GAGE13Q4V321 117 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 NTM-AS1Q6ZSK4 140 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 Q9H8V8 135 aa10.03□□□□□ -0.8
SCAMP2-203ENST00000563663 TSPAN13O95857 204 aa10.02□□□□□ -0.81
SCAMP2-203ENST00000563663 SH2D6Q7Z4S9 175 aa10.02□□□□□ -0.81
SCAMP2-203ENST00000563663 WFDC10BQ8IUB3 73 aa10.02□□□□□ -0.81
SCAMP2-203ENST00000563663 SPANXDQ9BXN6 97 aa10.02□□□□□ -0.81
SCAMP2-203ENST00000563663 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
SCAMP2-203ENST00000563663 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
SCAMP2-203ENST00000563663 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
SCAMP2-203ENST00000563663 M0R2N4 97 aa10.01□□□□□ -0.81
SCAMP2-203ENST00000563663 LITAFQ99732 161 aa10.01□□□□□ -0.81
SCAMP2-203ENST00000563663 NDUFA12Q9UI09 145 aa10.01□□□□□ -0.81
SCAMP2-203ENST00000563663 APOMO95445 188 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms