RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 ORAOV1Q8WV07 137 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
NME3-204ENST00000563498 LINC00862A6NCI5 91 aa11.25□□□□□ -0.61
NME3-204ENST00000563498 KRTAP1-4P0C5Y4 121 aa11.25□□□□□ -0.61
NME3-204ENST00000563498 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
NME3-204ENST00000563498 TCAPO15273 167 aa11.24□□□□□ -0.61
NME3-204ENST00000563498 C20orf78Q9BR46 151 aa11.24□□□□□ -0.61
NME3-204ENST00000563498 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
NME3-204ENST00000563498 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
NME3-204ENST00000563498 FAM104AQ969W3 186 aa11.23□□□□□ -0.61
NME3-204ENST00000563498 TRBV24-1A0A075B6N3 115 aa11.22□□□□□ -0.61
NME3-204ENST00000563498 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
NME3-204ENST00000563498 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
NME3-204ENST00000563498 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
NME3-204ENST00000563498 C6orf48Q9UBA6 75 aa11.22□□□□□ -0.61
NME3-204ENST00000563498 V9GYV3 84 aa11.22□□□□□ -0.61
NME3-204ENST00000563498 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
NME3-204ENST00000563498 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
NME3-204ENST00000563498 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
NME3-204ENST00000563498 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
NME3-204ENST00000563498 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.61
NME3-204ENST00000563498 SPANXA1Q9NS26 97 aa11.21□□□□□ -0.61
NME3-204ENST00000563498 UBE2D1P51668 147 aa11.2□□□□□ -0.62
NME3-204ENST00000563498 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
NME3-204ENST00000563498 KRTAP7-1Q8IUC3 87 aa11.2□□□□□ -0.62
NME3-204ENST00000563498 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
NME3-204ENST00000563498 PRR4Q16378 134 aa11.19□□□□□ -0.62
NME3-204ENST00000563498 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
NME3-204ENST00000563498 ALKAL2Q6UX46 152 aa11.19□□□□□ -0.62
NME3-204ENST00000563498 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
NME3-204ENST00000563498 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
NME3-204ENST00000563498 M0QXV9 152 aa11.18□□□□□ -0.62
NME3-204ENST00000563498 UBE2BP63146 152 aa11.18□□□□□ -0.62
NME3-204ENST00000563498 HBBP68871 147 aa11.18□□□□□ -0.62
NME3-204ENST00000563498 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
NME3-204ENST00000563498 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
NME3-204ENST00000563498 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
NME3-204ENST00000563498 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 CKS2P33552 79 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
NME3-204ENST00000563498 A0A1B0GW15 77 aa11.15□□□□□ -0.62
NME3-204ENST00000563498 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.62
NME3-204ENST00000563498 FAM74A3Q4VXF1 159 aa11.15□□□□□ -0.62
NME3-204ENST00000563498 NDUFC2-KCTD14E9PQ53 114 aa11.14□□□□□ -0.63
NME3-204ENST00000563498 SMIM27A0A1W2PRY6 76 aa11.13□□□□□ -0.63
NME3-204ENST00000563498 S100A12P80511 92 aa11.12□□□□□ -0.63
NME3-204ENST00000563498 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
NME3-204ENST00000563498 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
NME3-204ENST00000563498 ZNF861PO60384 105 aa11.11□□□□□ -0.63
NME3-204ENST00000563498 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
NME3-204ENST00000563498 PACRGQ96M98 296 aaPredicted RBP11.11□□□□□ -0.63
NME3-204ENST00000563498 D6R8Y8 96 aa11.1□□□□□ -0.63
NME3-204ENST00000563498 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
NME3-204ENST00000563498 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
NME3-204ENST00000563498 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
NME3-204ENST00000563498 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
NME3-204ENST00000563498 NPYP01303 97 aa11.09□□□□□ -0.63
NME3-204ENST00000563498 PPBPP02775 128 aa11.09□□□□□ -0.63
NME3-204ENST00000563498 S100A8P05109 93 aa11.09□□□□□ -0.63
NME3-204ENST00000563498 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
NME3-204ENST00000563498 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
NME3-204ENST00000563498 F8W036 122 aa11.08□□□□□ -0.64
NME3-204ENST00000563498 NUPR1O60356 82 aa11.08□□□□□ -0.64
NME3-204ENST00000563498 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
NME3-204ENST00000563498 ADIRFQ15847 76 aa11.07□□□□□ -0.64
NME3-204ENST00000563498 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
NME3-204ENST00000563498 RAB5AP20339 215 aa11.06□□□□□ -0.64
NME3-204ENST00000563498 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
NME3-204ENST00000563498 NAT8Q9UHE5 227 aa11.06□□□□□ -0.64
NME3-204ENST00000563498 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
NME3-204ENST00000563498 COMMD7Q86VX2 200 aa11.05□□□□□ -0.64
NME3-204ENST00000563498 RAB14P61106 215 aa11.04□□□□□ -0.64
NME3-204ENST00000563498 MRPL54Q6P161 138 aaKnown RBP11.04□□□□□ -0.64
NME3-204ENST00000563498 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
NME3-204ENST00000563498 TSPAN13O95857 204 aa11.03□□□□□ -0.64
NME3-204ENST00000563498 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
NME3-204ENST00000563498 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
NME3-204ENST00000563498 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
NME3-204ENST00000563498 LINC00469Q8N7U9 141 aa11.02□□□□□ -0.65
NME3-204ENST00000563498 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
NME3-204ENST00000563498 PRSS2P07478 247 aa11.01□□□□□ -0.65
NME3-204ENST00000563498 CKS1BP61024 79 aa11.01□□□□□ -0.65
NME3-204ENST00000563498 LCE2AQ5TA79 106 aaPredicted RBP11.01□□□□□ -0.65
NME3-204ENST00000563498 Q6ZN92 141 aa11.01□□□□□ -0.65
NME3-204ENST00000563498 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
NME3-204ENST00000563498 PRSS47A8MTI9 375 aa11□□□□□ -0.65
NME3-204ENST00000563498 TMEM136Q6ZRR5 245 aa11□□□□□ -0.65
NME3-204ENST00000563498 PRELID3AQ96N28 172 aa11□□□□□ -0.65
NME3-204ENST00000563498 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
NME3-204ENST00000563498 A0A087X002 238 aa10.99□□□□□ -0.65
NME3-204ENST00000563498 C9JQL5 133 aa10.99□□□□□ -0.65
NME3-204ENST00000563498 CRYGAP11844 174 aa10.99□□□□□ -0.65
NME3-204ENST00000563498 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
NME3-204ENST00000563498 C6orf226Q5I0X4 101 aa10.99□□□□□ -0.65
NME3-204ENST00000563498 Q8IZM0 81 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms