RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PIEZO2Q9H5I5 2752 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 TEX14Q8IWB6 1497 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 MAST4O15021 2626 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 CHD1O14646 1710 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 HIVEP3Q5T1R4 2406 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 ABCC5O15440 1437 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 I3L2K1 104 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 NDUFC1O43677 76 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 SAA2P0DJI9 122 aaPredicted RBP0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 Q6JHZ5 121 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 FAM213BQ8TBF2 198 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 ADGRL2O95490 1459 aa0.15□□□□□ -2.39
HMGB1P33-201ENST00000563485 SPTBN1Q01082 2364 aaKnown RBP0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 TULP4Q9NRJ4 1543 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 NCOR1O75376 2440 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 PKDREJQ9NTG1 2253 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 DOPEY2Q9Y3R5 2298 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 BCE1O60756 84 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 MPC2O95563 127 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 FAM223AQ8IWN6 122 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 DEFB123Q8N688 67 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 TP53AIP1Q9HCN2 124 aa0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 MAGI1Q96QZ7 1491 aaPredicted RBP0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
HMGB1P33-201ENST00000563485 TROQ12816 1431 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 CNTLNQ9NXG0 1405 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 NHSL1Q5SYE7 1610 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 HRNRQ86YZ3 2850 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 PTPRQQ9UMZ3 2332 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 ABCA2Q9BZC7 2435 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 C10orf142B7Z368 130 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 ATP6V1G2-DDX39BF2Z307 99 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 SPINK1P00995 79 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 HAMPP81172 84 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 Q5VSD8 79 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 NPVFQ9HCQ7 196 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 FAIMQ9NVQ4 179 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 PRO0255Q9UI72 69 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 ARL2-SNX15V9GYD0 113 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 FYCO1Q9BQS8 1478 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 ERCC6L2Q5T890 1561 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 UBR5O95071 2799 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 GVINP1Q7Z2Y8 2422 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 USF3Q68DE3 2245 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 ABCA3Q99758 1704 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 CC2D2AQ9P2K1 1620 aa0.13□□□□□ -2.39
HMGB1P33-201ENST00000563485 PRKDCP78527 4128 aaKnown RBP0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 VWFP04275 2813 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 IQSEC2Q5JU85 1478 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 hADV29S1A0JD25 119 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 CRYM-AS1A6NIL9 109 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 LINC00032P0C843 101 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 WFDC2Q14508 124 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 C10orf113Q5VZT2 155 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 Q8IZM0 81 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 MANBALQ9NQG1 85 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 TENM4Q6N022 2769 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 URB1O60287 2271 aaKnown RBP0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 PAPPAQ13219 1627 aa0.12□□□□□ -2.39
HMGB1P33-201ENST00000563485 FAT2Q9NYQ8 4349 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 BSNQ9UPA5 3926 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRBV25-1A0A075B6N4 114 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRBV6-1A0A0K0K1D8 114 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 H7BZZ5 65 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 S100A8P05109 93 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRAPPC2P0DI81 140 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRAPPC2BP0DI82 140 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 SNCAP37840 140 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 SEC11AP67812 179 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 PIGYQ3MUY2 71 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRGV9Q99603 122 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 DPY30Q9C005 99 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 PRO1933Q9H354 126 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 AP4S1Q9Y587 144 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 U3KQA8 63 aa0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 EPRSP07814 1512 aaKnown RBP0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 KDM5AP29375 1690 aaKnown RBP0.11□□□□□ -2.39
HMGB1P33-201ENST00000563485 BTAF1O14981 1849 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 C1orf167Q5SNV9 1468 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 MLH3Q9UHC1 1453 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 TOP2BQ02880 1626 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 ANKRD36BQ8N2N9 1353 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 CCNB3Q8WWL7 1395 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 ABCC2Q92887 1545 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRBV7-4A0A0J9YYF1 115 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 A0A1B0GWA3 101 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 FAM223BA6NKX1 122 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 M0R143 59 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 ATOX1O00244 68 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 MT-ATP8P03928 68 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 PKD1L1Q8TDX9 2849 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 DNAJC13O75165 2243 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 NUP188Q5SRE5 1749 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 FANCAO15360 1455 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 268.3 ms