RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 COX6A2Q02221 97 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 REG3AQ06141 175 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 LYSTQ99698 3801 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 CHAC1Q9BUX1 264 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 UBE2V1Q13404 147 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 UBE2DNLQ8IWF7 75 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
SMG1-208ENST00000563448 ZNF22P17026 224 aaPredicted RBP6.87□□□□□ -1.31
SMG1-208ENST00000563448 STPG4Q8N801 248 aa6.87□□□□□ -1.31
SMG1-208ENST00000563448 Q9H8V8 135 aa6.87□□□□□ -1.31
SMG1-208ENST00000563448 BATFQ16520 125 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 HERVK_113P63121 156 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 SS18Q15532 418 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
SMG1-208ENST00000563448 COX11Q9Y6N1 276 aa6.86□□□□□ -1.31
SMG1-208ENST00000563448 SEC11AP67812 179 aa6.85□□□□□ -1.31
SMG1-208ENST00000563448 UBE2WQ96B02 151 aa6.85□□□□□ -1.31
SMG1-208ENST00000563448 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
SMG1-208ENST00000563448 TENM2Q9NT68 2774 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 CCL25O15444 150 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 HSBP1L1C9JCN9 74 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 CRPP02741 224 aa6.84□□□□□ -1.31
SMG1-208ENST00000563448 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
SMG1-208ENST00000563448 IGHV3OR16-9A0A0B4J2B5 98 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 XCL1P47992 114 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 IGKV2D-26A0A0A0MRZ7 120 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 IBA57-AS1B1ANH7 110 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 MIAQ16674 131 aa6.83□□□□□ -1.32
SMG1-208ENST00000563448 TRAV8-3A0A0A6YYJ7 113 aa6.82□□□□□ -1.32
SMG1-208ENST00000563448 TRAV8-4A0A0B4J246 113 aa6.82□□□□□ -1.32
SMG1-208ENST00000563448 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
SMG1-208ENST00000563448 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
SMG1-208ENST00000563448 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
SMG1-208ENST00000563448 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 E9PLD3 99 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 H3BRM9 83 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 FOXI1Q12951 378 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 A0A087WZ39 114 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 HERVK_113P61574 105 aa6.81□□□□□ -1.32
SMG1-208ENST00000563448 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 NMUP48645 174 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 Q9HAA7 133 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
SMG1-208ENST00000563448 LEPROTO15243 131 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 TSPEAR-AS2P59090 65 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 TTTY13Q9BZ97 58 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 IGKV2D-24A0A075B6R9 120 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
SMG1-208ENST00000563448 NBDYA0A0U1RRE5 68 aa6.78□□□□□ -1.32
SMG1-208ENST00000563448 COX8AP10176 69 aa6.78□□□□□ -1.32
SMG1-208ENST00000563448 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
SMG1-208ENST00000563448 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
SMG1-208ENST00000563448 C1orf43Q9BWL3 253 aa6.78□□□□□ -1.32
SMG1-208ENST00000563448 J3QQQ9 107 aa6.77□□□□□ -1.32
SMG1-208ENST00000563448 K7ERU9 68 aa6.77□□□□□ -1.32
SMG1-208ENST00000563448 COX7A2LO14548 114 aa6.77□□□□□ -1.32
SMG1-208ENST00000563448 VAMP3Q15836 100 aa6.77□□□□□ -1.32
SMG1-208ENST00000563448 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.32
SMG1-208ENST00000563448 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
SMG1-208ENST00000563448 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
SMG1-208ENST00000563448 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 LY6G6CO95867 125 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
SMG1-208ENST00000563448 MALP21145 153 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 SVIPQ8NHG7 77 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 COX7B2Q8TF08 81 aa6.76□□□□□ -1.33
SMG1-208ENST00000563448 SLC25A34Q6PIV7 304 aa6.75□□□□□ -1.33
SMG1-208ENST00000563448 RMI2Q96E14 147 aa6.75□□□□□ -1.33
SMG1-208ENST00000563448 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
SMG1-208ENST00000563448 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
SMG1-208ENST00000563448 MYMXA0A1B0GTQ4 84 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 M0R2N4 97 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 APOMO95445 188 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 Q6ZR54 194 aa6.74□□□□□ -1.33
SMG1-208ENST00000563448 KMT2AQ03164 3969 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms