RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
IRF8-203ENST00000563180 A0A096LNJ9 63 aa11.11□□□□□ -0.63
IRF8-203ENST00000563180 IGHV3OR16-9A0A0B4J2B5 98 aa11.11□□□□□ -0.63
IRF8-203ENST00000563180 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
IRF8-203ENST00000563180 PMCHL1Q16048 86 aa11.11□□□□□ -0.63
IRF8-203ENST00000563180 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
IRF8-203ENST00000563180 COX6A2Q02221 97 aa11.1□□□□□ -0.63
IRF8-203ENST00000563180 LINC00526Q96FQ7 95 aa11.1□□□□□ -0.63
IRF8-203ENST00000563180 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
IRF8-203ENST00000563180 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
IRF8-203ENST00000563180 APOMO95445 188 aa11.09□□□□□ -0.63
IRF8-203ENST00000563180 HBDP02042 147 aa11.09□□□□□ -0.63
IRF8-203ENST00000563180 XGP55808 180 aa11.09□□□□□ -0.63
IRF8-203ENST00000563180 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
IRF8-203ENST00000563180 BAGE3Q86Y29 109 aa11.08□□□□□ -0.64
IRF8-203ENST00000563180 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
IRF8-203ENST00000563180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
IRF8-203ENST00000563180 HAMPP81172 84 aa11.07□□□□□ -0.64
IRF8-203ENST00000563180 RYR1P21817 5038 aa11.07□□□□□ -0.64
IRF8-203ENST00000563180 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
IRF8-203ENST00000563180 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
IRF8-203ENST00000563180 IGLV4-69A0A075B6H9 119 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 A0A087WZ39 114 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 PMVKQ15126 192 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 Q6ZSA8 131 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 ORAOV1Q8WV07 137 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
IRF8-203ENST00000563180 S100A1P23297 94 aa11.04□□□□□ -0.64
IRF8-203ENST00000563180 SEC11AP67812 179 aa11.04□□□□□ -0.64
IRF8-203ENST00000563180 SPAG11BQ08648 103 aa11.04□□□□□ -0.64
IRF8-203ENST00000563180 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
IRF8-203ENST00000563180 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
IRF8-203ENST00000563180 HERC2O95714 4834 aa11.04□□□□□ -0.64
IRF8-203ENST00000563180 NDUFA6P56556 154 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 HERVK_113P63121 156 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
IRF8-203ENST00000563180 PCLOQ9Y6V0 5065 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 HSBP1O75506 76 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 ATP5LO75964 103 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
IRF8-203ENST00000563180 SERF1AO75920 110 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 LINC01561Q8N1V8 128 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 C2orf48Q96LS8 159 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 CAMK2N2Q96S95 79 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
IRF8-203ENST00000563180 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
IRF8-203ENST00000563180 LINC00310P59036 64 aa11.01□□□□□ -0.65
IRF8-203ENST00000563180 DNAH8Q96JB1 4490 aa11□□□□□ -0.65
IRF8-203ENST00000563180 Q6ZRU5 148 aa11□□□□□ -0.65
IRF8-203ENST00000563180 CHAC1Q9BUX1 264 aa11□□□□□ -0.65
IRF8-203ENST00000563180 SMR3BP02814 79 aaPredicted RBP10.99□□□□□ -0.65
IRF8-203ENST00000563180 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
IRF8-203ENST00000563180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
IRF8-203ENST00000563180 PANO1I0J062 215 aa10.98□□□□□ -0.65
IRF8-203ENST00000563180 NUPR1O60356 82 aa10.98□□□□□ -0.65
IRF8-203ENST00000563180 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
IRF8-203ENST00000563180 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
IRF8-203ENST00000563180 IFI27L1Q96BM0 104 aa10.98□□□□□ -0.65
IRF8-203ENST00000563180 HSPG2P98160 4391 aa10.97□□□□□ -0.65
IRF8-203ENST00000563180 CHTF8P0CG12 524 aa10.97□□□□□ -0.65
IRF8-203ENST00000563180 Q8N1X5 172 aa10.97□□□□□ -0.65
IRF8-203ENST00000563180 PACRGQ96M98 296 aaPredicted RBP10.97□□□□□ -0.65
IRF8-203ENST00000563180 F8WDY8 70 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 NDUFA1O15239 70 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
IRF8-203ENST00000563180 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
IRF8-203ENST00000563180 IGLV5-45A0A087WSX0 123 aa10.95□□□□□ -0.66
IRF8-203ENST00000563180 PRSS2P07478 247 aa10.95□□□□□ -0.66
IRF8-203ENST00000563180 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
IRF8-203ENST00000563180 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
IRF8-203ENST00000563180 UNQ6190/PRO20217Q6UXQ8 127 aa10.95□□□□□ -0.66
IRF8-203ENST00000563180 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
IRF8-203ENST00000563180 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
IRF8-203ENST00000563180 A0A096LNI7 61 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 LOC107984640A0A0U1RRK4 108 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
IRF8-203ENST00000563180 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 C2orf82Q6UX34 121 aa10.93□□□□□ -0.66
IRF8-203ENST00000563180 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
IRF8-203ENST00000563180 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms