RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
CLK3-207ENST00000562389 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
CLK3-207ENST00000562389 LINC00614P0C842 121 aa10.81□□□□□ -0.68
CLK3-207ENST00000562389 MALP21145 153 aa10.81□□□□□ -0.68
CLK3-207ENST00000562389 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
CLK3-207ENST00000562389 VCX2Q9H322 139 aa10.81□□□□□ -0.68
CLK3-207ENST00000562389 UBE2D1P51668 147 aa10.8□□□□□ -0.68
CLK3-207ENST00000562389 RAB5BP61020 215 aa10.8□□□□□ -0.68
CLK3-207ENST00000562389 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
CLK3-207ENST00000562389 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
CLK3-207ENST00000562389 APOMO95445 188 aa10.79□□□□□ -0.68
CLK3-207ENST00000562389 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
CLK3-207ENST00000562389 FAM19A3Q7Z5A8 133 aa10.79□□□□□ -0.68
CLK3-207ENST00000562389 A0A096LNJ9 63 aa10.78□□□□□ -0.68
CLK3-207ENST00000562389 COLCA2A8K830 154 aa10.78□□□□□ -0.68
CLK3-207ENST00000562389 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
CLK3-207ENST00000562389 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
CLK3-207ENST00000562389 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
CLK3-207ENST00000562389 TRGC2P03986 189 aa10.77□□□□□ -0.69
CLK3-207ENST00000562389 HBDP02042 147 aa10.76□□□□□ -0.69
CLK3-207ENST00000562389 COX6A2Q02221 97 aa10.76□□□□□ -0.69
CLK3-207ENST00000562389 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
CLK3-207ENST00000562389 OR10D4PQ8NGN7 298 aa10.76□□□□□ -0.69
CLK3-207ENST00000562389 A0A087WZ39 114 aa10.75□□□□□ -0.69
CLK3-207ENST00000562389 SEC11AP67812 179 aa10.75□□□□□ -0.69
CLK3-207ENST00000562389 HAMPP81172 84 aa10.75□□□□□ -0.69
CLK3-207ENST00000562389 Q8N1X5 172 aa10.75□□□□□ -0.69
CLK3-207ENST00000562389 LINC00526Q96FQ7 95 aa10.75□□□□□ -0.69
CLK3-207ENST00000562389 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
CLK3-207ENST00000562389 SCO1O75880 301 aa10.74□□□□□ -0.69
CLK3-207ENST00000562389 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
CLK3-207ENST00000562389 LINC01561Q8N1V8 128 aa10.74□□□□□ -0.69
CLK3-207ENST00000562389 CHCHD1Q96BP2 118 aaKnown RBP10.74□□□□□ -0.69
CLK3-207ENST00000562389 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
CLK3-207ENST00000562389 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
CLK3-207ENST00000562389 HERVK_113P63121 156 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 SYCNQ0VAF6 134 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 PDZD11Q5EBL8 140 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 SCXQ7RTU7 201 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 ORAOV1Q8WV07 137 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 C2orf48Q96LS8 159 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
CLK3-207ENST00000562389 PMVKQ15126 192 aa10.72□□□□□ -0.69
CLK3-207ENST00000562389 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
CLK3-207ENST00000562389 F8WDY8 70 aa10.71□□□□□ -0.69
CLK3-207ENST00000562389 CIRBPQ14011 172 aaKnown RBP10.71□□□□□ -0.69
CLK3-207ENST00000562389 CAMK2N2Q96S95 79 aa10.71□□□□□ -0.69
CLK3-207ENST00000562389 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
CLK3-207ENST00000562389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
CLK3-207ENST00000562389 A0A0J9YXV3 536 aa10.7□□□□□ -0.7
CLK3-207ENST00000562389 TINCRA0A1B0GVN0 87 aa10.7□□□□□ -0.7
CLK3-207ENST00000562389 Q6ZRU5 148 aa10.7□□□□□ -0.7
CLK3-207ENST00000562389 BAGE3Q86Y29 109 aa10.7□□□□□ -0.7
CLK3-207ENST00000562389 GEMIN7Q9H840 131 aaKnown RBP10.7□□□□□ -0.7
CLK3-207ENST00000562389 PANO1I0J062 215 aa10.69□□□□□ -0.7
CLK3-207ENST00000562389 ATP5LO75964 103 aa10.69□□□□□ -0.7
CLK3-207ENST00000562389 CIRBP-AS1Q8TBR5 109 aa10.69□□□□□ -0.7
CLK3-207ENST00000562389 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
CLK3-207ENST00000562389 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
CLK3-207ENST00000562389 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
CLK3-207ENST00000562389 HSBP1O75506 76 aa10.67□□□□□ -0.7
CLK3-207ENST00000562389 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
CLK3-207ENST00000562389 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
CLK3-207ENST00000562389 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
CLK3-207ENST00000562389 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
CLK3-207ENST00000562389 NDUFA1O15239 70 aa10.66□□□□□ -0.7
CLK3-207ENST00000562389 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
CLK3-207ENST00000562389 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
CLK3-207ENST00000562389 LINC00469Q8N7U9 141 aa10.66□□□□□ -0.7
CLK3-207ENST00000562389 MRPL35Q9NZE8 188 aaKnown RBP10.66□□□□□ -0.7
CLK3-207ENST00000562389 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
CLK3-207ENST00000562389 NDUFA6P56556 154 aa10.65□□□□□ -0.7
CLK3-207ENST00000562389 LINC00310P59036 64 aa10.65□□□□□ -0.7
CLK3-207ENST00000562389 Q5VSD8 79 aa10.65□□□□□ -0.7
CLK3-207ENST00000562389 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
CLK3-207ENST00000562389 A0A096LNI7 61 aa10.64□□□□□ -0.71
CLK3-207ENST00000562389 LOC107984640A0A0U1RRK4 108 aa10.64□□□□□ -0.71
CLK3-207ENST00000562389 SERF1AO75920 110 aa10.64□□□□□ -0.71
CLK3-207ENST00000562389 Q8IZM0 81 aa10.64□□□□□ -0.71
CLK3-207ENST00000562389 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 FAM229AH3BQW9 127 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 S100A1P23297 94 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 FAM19A2Q8N3H0 131 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 LINC00474Q9P2X8 69 aa10.63□□□□□ -0.71
CLK3-207ENST00000562389 SMIM1B2RUZ4 78 aa10.62□□□□□ -0.71
CLK3-207ENST00000562389 PRSS2P07478 247 aa10.62□□□□□ -0.71
CLK3-207ENST00000562389 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
CLK3-207ENST00000562389 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
CLK3-207ENST00000562389 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
CLK3-207ENST00000562389 A0A087WYN8 130 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 TRBV30A0A0K0K1B3 111 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 PTTG1IPP53801 180 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 MAJINQ3KP22 176 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
CLK3-207ENST00000562389 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 392.1 ms