RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 K7ERU9 68 aa11.48□□□□□ -0.57
PKD1-225ENST00000562297 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
PKD1-225ENST00000562297 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
PKD1-225ENST00000562297 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
PKD1-225ENST00000562297 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
PKD1-225ENST00000562297 GEMIN7Q9H840 131 aaKnown RBP11.48□□□□□ -0.57
PKD1-225ENST00000562297 SPCS1Q9Y6A9 102 aa11.48□□□□□ -0.57
PKD1-225ENST00000562297 IGHV3-30-3P0DP02 117 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 KPRPQ5T749 579 aaPredicted RBP11.47□□□□□ -0.57
PKD1-225ENST00000562297 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 IGHV1-58A0A0C4DH39 117 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 FABP2P12104 132 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 HTN3P15516 51 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 HERVK_113P63121 156 aa11.47□□□□□ -0.57
PKD1-225ENST00000562297 K7EIL1 84 aa11.46□□□□□ -0.57
PKD1-225ENST00000562297 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
PKD1-225ENST00000562297 SPINK8P0C7L1 97 aa11.45□□□□□ -0.58
PKD1-225ENST00000562297 IGLL5B9A064 214 aa11.45□□□□□ -0.58
PKD1-225ENST00000562297 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
PKD1-225ENST00000562297 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
PKD1-225ENST00000562297 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
PKD1-225ENST00000562297 A0A0J9YWU9 116 aa11.43□□□□□ -0.58
PKD1-225ENST00000562297 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
PKD1-225ENST00000562297 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
PKD1-225ENST00000562297 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
PKD1-225ENST00000562297 Q6ZTC4 211 aa11.42□□□□□ -0.58
PKD1-225ENST00000562297 ICOSQ9Y6W8 199 aa11.42□□□□□ -0.58
PKD1-225ENST00000562297 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
PKD1-225ENST00000562297 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
PKD1-225ENST00000562297 SMIM1B2RUZ4 78 aa11.4□□□□□ -0.58
PKD1-225ENST00000562297 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.58
PKD1-225ENST00000562297 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
PKD1-225ENST00000562297 TMEM262E9PQX1 116 aa11.4□□□□□ -0.59
PKD1-225ENST00000562297 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.59
PKD1-225ENST00000562297 COL7A1Q02388 2944 aa11.4□□□□□ -0.59
PKD1-225ENST00000562297 H3BNG1 76 aa11.39□□□□□ -0.59
PKD1-225ENST00000562297 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
PKD1-225ENST00000562297 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
PKD1-225ENST00000562297 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
PKD1-225ENST00000562297 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
PKD1-225ENST00000562297 Q8N3U1 123 aa11.38□□□□□ -0.59
PKD1-225ENST00000562297 IGHV3OR16-9A0A0B4J2B5 98 aa11.37□□□□□ -0.59
PKD1-225ENST00000562297 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
PKD1-225ENST00000562297 NANOS2P60321 138 aaKnown RBP11.37□□□□□ -0.59
PKD1-225ENST00000562297 LELP1Q5T871 98 aa11.37□□□□□ -0.59
PKD1-225ENST00000562297 C11orf45Q8TAV5 145 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 LITAFQ99732 161 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 DNHD1Q96M86 4753 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 A6NJY4 79 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 KRTAP21-3Q3LHN1 58 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 DEFB121Q5J5C9 76 aa11.36□□□□□ -0.59
PKD1-225ENST00000562297 LYPD5Q6UWN5 251 aa11.35□□□□□ -0.59
PKD1-225ENST00000562297 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
PKD1-225ENST00000562297 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
PKD1-225ENST00000562297 NDUFA1O15239 70 aa11.34□□□□□ -0.59
PKD1-225ENST00000562297 APOMO95445 188 aa11.34□□□□□ -0.59
PKD1-225ENST00000562297 LINC00269Q8N2A0 174 aa11.33□□□□□ -0.6
PKD1-225ENST00000562297 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
PKD1-225ENST00000562297 A0A087WZ39 114 aa11.32□□□□□ -0.6
PKD1-225ENST00000562297 CLPSL2Q6UWE3 100 aa11.32□□□□□ -0.6
PKD1-225ENST00000562297 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
PKD1-225ENST00000562297 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
PKD1-225ENST00000562297 TSPAN13O95857 204 aa11.31□□□□□ -0.6
PKD1-225ENST00000562297 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
PKD1-225ENST00000562297 H3BMG7 143 aa11.31□□□□□ -0.6
PKD1-225ENST00000562297 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
PKD1-225ENST00000562297 CFC1BP0CG36 223 aa11.3□□□□□ -0.6
PKD1-225ENST00000562297 CFC1P0CG37 223 aa11.3□□□□□ -0.6
PKD1-225ENST00000562297 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
PKD1-225ENST00000562297 Q9H8V8 135 aa11.3□□□□□ -0.6
PKD1-225ENST00000562297 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
PKD1-225ENST00000562297 SS18Q15532 418 aa11.3□□□□□ -0.6
PKD1-225ENST00000562297 XCL1P47992 114 aa11.29□□□□□ -0.6
PKD1-225ENST00000562297 REG3AQ06141 175 aa11.29□□□□□ -0.6
PKD1-225ENST00000562297 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
PKD1-225ENST00000562297 TIMM17BO60830 172 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 SPANXDQ9BXN6 97 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 WFDC2Q14508 124 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
PKD1-225ENST00000562297 A4D1N5 150 aa11.27□□□□□ -0.61
PKD1-225ENST00000562297 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
PKD1-225ENST00000562297 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
PKD1-225ENST00000562297 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
PKD1-225ENST00000562297 ESRGQ1W209 222 aa11.26□□□□□ -0.61
PKD1-225ENST00000562297 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
PKD1-225ENST00000562297 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
PKD1-225ENST00000562297 MIAQ16674 131 aa11.26□□□□□ -0.61
PKD1-225ENST00000562297 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
PKD1-225ENST00000562297 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
PKD1-225ENST00000562297 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
PKD1-225ENST00000562297 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
PKD1-225ENST00000562297 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
PKD1-225ENST00000562297 F8W1H4 67 aa11.25□□□□□ -0.61
PKD1-225ENST00000562297 PRO0461Q9UI25 63 aa11.25□□□□□ -0.61
PKD1-225ENST00000562297 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms