RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SLC25A34Q6PIV7 304 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 CEMP1Q6PRD7 247 aaPredicted RBP4.55□□□□□ -1.68
CAPN3-210ENST00000561817 MRPL52Q86TS9 123 aaKnown RBP4.55□□□□□ -1.68
CAPN3-210ENST00000561817 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 SNHG12Q9BXW3 62 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 TAL2Q16559 108 aa4.54□□□□□ -1.68
CAPN3-210ENST00000561817 Q6ZUT4 128 aa4.54□□□□□ -1.68
CAPN3-210ENST00000561817 PCP2Q8IVA1 136 aa4.54□□□□□ -1.68
CAPN3-210ENST00000561817 PRADC1Q9BSG0 188 aa4.54□□□□□ -1.68
CAPN3-210ENST00000561817 PRO0255Q9UI72 69 aa4.54□□□□□ -1.68
CAPN3-210ENST00000561817 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
CAPN3-210ENST00000561817 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 C9orf118A6NHY6 69 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 E9PLD3 99 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 SPART-AS1P0CW21 52 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
CAPN3-210ENST00000561817 XGP55808 180 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 DAD1P61803 113 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 C12orf74Q32Q52 190 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 MAPKAPK5-AS1Q8N8E1 139 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
CAPN3-210ENST00000561817 C11orf68Q9H3H3 251 aaKnown RBP4.53□□□□□ -1.68
CAPN3-210ENST00000561817 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 TMEM223A0PJW6 202 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 H7C423 109 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 M0R143 59 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 ATP5G1P05496 136 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 ZNF22P17026 224 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-210ENST00000561817 UBE2D1P51668 147 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 TCTAP57738 103 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 RNASE13Q5GAN3 156 aaKnown RBP4.52□□□□□ -1.69
CAPN3-210ENST00000561817 PAPPA-AS1Q5QFB9 102 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 C2orf88Q9BSF0 95 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 TMEM243Q9BU79 118 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 TM2D2Q9BX73 214 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
CAPN3-210ENST00000561817 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TINCRA0A1B0GVN0 87 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 NMUP48645 174 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TSPEAR-AS2P59090 65 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TMEM97Q5BJF2 176 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TM2D3Q9BRN9 247 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 CHAC1Q9BUX1 264 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 HIGD1BQ9P298 99 aa4.51□□□□□ -1.69
CAPN3-210ENST00000561817 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
CAPN3-210ENST00000561817 OXTP01178 125 aa4.5□□□□□ -1.69
CAPN3-210ENST00000561817 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
CAPN3-210ENST00000561817 COX6A2Q02221 97 aa4.5□□□□□ -1.69
CAPN3-210ENST00000561817 SPANXB1Q9NS25 103 aaPredicted RBP4.5□□□□□ -1.69
CAPN3-210ENST00000561817 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 A0A096LPF7 62 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 A0A0J9YY99 117 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 ZNF25P17030 456 aaPredicted RBP4.49□□□□□ -1.69
CAPN3-210ENST00000561817 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
CAPN3-210ENST00000561817 GAGE6Q13070 117 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 MPV17L2Q567V2 206 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 BVES-AS1Q5T3Y7 98 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 FAM19A1Q7Z5A9 133 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 OR5A1Q8NGJ0 315 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 B9D2Q9BPU9 175 aa4.49□□□□□ -1.69
CAPN3-210ENST00000561817 DNAH1Q9P2D7 4330 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 MYMXA0A1B0GTQ4 84 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 H3BNG1 76 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 LEPROTO15243 131 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 TMEM170BQ5T4T1 132 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 Q6ZTC4 211 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
CAPN3-210ENST00000561817 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
CAPN3-210ENST00000561817 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 J3QQQ9 107 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 UBE2L6O14933 153 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
CAPN3-210ENST00000561817 HERVK_113P61574 105 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 HSD52Q0P140 79 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 CHCHD5Q9BSY4 110 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 DNAH7Q8WXX0 4024 aa4.47□□□□□ -1.69
CAPN3-210ENST00000561817 ZNF815PA8K554 130 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 IGHV3-30-3P0DP02 117 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 HTN3P15516 51 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
CAPN3-210ENST00000561817 HERVK_113P63121 156 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 LELP1Q5T871 98 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms