RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 A0A096LNJ9 63 aa15.8■□□□□ 0.12
TMEM249-201ENST00000561638 CSDC2Q9Y534 153 aaKnown RBP15.8■□□□□ 0.12
TMEM249-201ENST00000561638 NBDYA0A0U1RRE5 68 aa15.8■□□□□ 0.12
TMEM249-201ENST00000561638 LCE6AA0A183 80 aa15.79■□□□□ 0.12
TMEM249-201ENST00000561638 CRPP02741 224 aa15.79■□□□□ 0.12
TMEM249-201ENST00000561638 CLPSL2Q6UWE3 100 aa15.79■□□□□ 0.12
TMEM249-201ENST00000561638 LINC00269Q8N2A0 174 aa15.79■□□□□ 0.12
TMEM249-201ENST00000561638 PYGO1Q9Y3Y4 419 aa15.79■□□□□ 0.12
TMEM249-201ENST00000561638 hDV102S1A0JD36 115 aa15.78■□□□□ 0.12
TMEM249-201ENST00000561638 M0R2N4 97 aa15.78■□□□□ 0.12
TMEM249-201ENST00000561638 ERASQ7Z444 233 aa15.78■□□□□ 0.12
TMEM249-201ENST00000561638 SPCS1Q9Y6A9 102 aa15.78■□□□□ 0.12
TMEM249-201ENST00000561638 RNASE13Q5GAN3 156 aaKnown RBP15.77■□□□□ 0.12
TMEM249-201ENST00000561638 Q6ZUT4 128 aa15.77■□□□□ 0.12
TMEM249-201ENST00000561638 OPRPNQ99935 248 aaPredicted RBP15.77■□□□□ 0.12
TMEM249-201ENST00000561638 CDC42SE2Q9NRR3 84 aa15.77■□□□□ 0.12
TMEM249-201ENST00000561638 IGKV3OR2-268A0A0C4DH90 116 aa15.77■□□□□ 0.11
TMEM249-201ENST00000561638 A0A1W2PPM0 123 aa15.77■□□□□ 0.11
TMEM249-201ENST00000561638 IGIPA6NJ69 53 aa15.77■□□□□ 0.11
TMEM249-201ENST00000561638 UBE2WQ96B02 151 aa15.77■□□□□ 0.11
TMEM249-201ENST00000561638 TIMM17AQ99595 171 aa15.77■□□□□ 0.11
TMEM249-201ENST00000561638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.76■□□□□ 0.11
TMEM249-201ENST00000561638 TMEM141Q96I45 108 aa15.76■□□□□ 0.11
TMEM249-201ENST00000561638 REG3AQ06141 175 aa15.75■□□□□ 0.11
TMEM249-201ENST00000561638 KRTAP1-5Q9BYS1 174 aa15.75■□□□□ 0.11
TMEM249-201ENST00000561638 IGLV4-3A0A075B6K6 122 aa15.75■□□□□ 0.11
TMEM249-201ENST00000561638 MRPS36P82909 103 aaKnown RBP15.75■□□□□ 0.11
TMEM249-201ENST00000561638 PAPPA-AS1Q5QFB9 102 aa15.75■□□□□ 0.11
TMEM249-201ENST00000561638 ALMS1Q8TCU4 4167 aa15.74■□□□□ 0.11
TMEM249-201ENST00000561638 H3BUT2 72 aa15.74■□□□□ 0.11
TMEM249-201ENST00000561638 ATP5LO75964 103 aa15.74■□□□□ 0.11
TMEM249-201ENST00000561638 Q9HAA7 133 aa15.74■□□□□ 0.11
TMEM249-201ENST00000561638 VPS13DQ5THJ4 4388 aa15.74■□□□□ 0.11
TMEM249-201ENST00000561638 IBA57-AS1B1ANH7 110 aa15.73■□□□□ 0.11
TMEM249-201ENST00000561638 DNAH1Q9P2D7 4330 aa15.73■□□□□ 0.11
TMEM249-201ENST00000561638 C2orf91Q6ZV80 131 aa15.72■□□□□ 0.11
TMEM249-201ENST00000561638 VCX2Q9H322 139 aa15.72■□□□□ 0.11
TMEM249-201ENST00000561638 F8W1H4 67 aa15.72■□□□□ 0.11
TMEM249-201ENST00000561638 TRAV8-3A0A0A6YYJ7 113 aa15.71■□□□□ 0.11
TMEM249-201ENST00000561638 SMIM13P0DJ93 91 aa15.71■□□□□ 0.11
TMEM249-201ENST00000561638 PRR34Q9NV39 138 aa15.71■□□□□ 0.11
TMEM249-201ENST00000561638 ENHOQ6UWT2 76 aa15.7■□□□□ 0.1
TMEM249-201ENST00000561638 BOD1L2Q8IYS8 172 aa15.7■□□□□ 0.1
TMEM249-201ENST00000561638 FAM104AQ969W3 186 aa15.7■□□□□ 0.1
TMEM249-201ENST00000561638 MIAQ16674 131 aa15.7■□□□□ 0.1
TMEM249-201ENST00000561638 TRAV13-1A0A0B4J241 112 aa15.69■□□□□ 0.1
TMEM249-201ENST00000561638 IFI27L1Q96BM0 104 aa15.69■□□□□ 0.1
TMEM249-201ENST00000561638 IGLV10-54A0A075B6I4 117 aa15.68■□□□□ 0.1
TMEM249-201ENST00000561638 RPL24P83731 157 aaKnown RBP15.68■□□□□ 0.1
TMEM249-201ENST00000561638 Q6ZR54 194 aa15.68■□□□□ 0.1
TMEM249-201ENST00000561638 GAGE12HA6NDE8 117 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 CKS1BP61024 79 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 ZC2HC1BQ5TFG8 222 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 LINC00173Q6ZV60 143 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 BAALCQ8WXS3 180 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 PRSS1P07477 247 aa15.67■□□□□ 0.1
TMEM249-201ENST00000561638 C1orf43Q9BWL3 253 aa15.66■□□□□ 0.1
TMEM249-201ENST00000561638 HIGD1BQ9P298 99 aa15.66■□□□□ 0.1
TMEM249-201ENST00000561638 IGKV2D-24A0A075B6R9 120 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 H0Y8G0 127 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 PMVKQ15126 192 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 SS18Q15532 418 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 RMI2Q96E14 147 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 AMELXQ99217 191 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 KMT2AQ03164 3969 aa15.65■□□□□ 0.1
TMEM249-201ENST00000561638 TRAV8-4A0A0B4J246 113 aa15.64■□□□□ 0.1
TMEM249-201ENST00000561638 LINC00959A0A1B0GUT2 108 aa15.64■□□□□ 0.1
TMEM249-201ENST00000561638 NFE4Q86UQ8 179 aa15.63■□□□□ 0.09
TMEM249-201ENST00000561638 A6NJY4 79 aa15.62■□□□□ 0.09
TMEM249-201ENST00000561638 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
TMEM249-201ENST00000561638 XCL1P47992 114 aa15.62■□□□□ 0.09
TMEM249-201ENST00000561638 C1orf134Q5TEV5 83 aa15.62■□□□□ 0.09
TMEM249-201ENST00000561638 CHCHD10Q8WYQ3 142 aaPredicted RBP15.62■□□□□ 0.09
TMEM249-201ENST00000561638 CFAP161Q6P656 301 aa15.61■□□□□ 0.09
TMEM249-201ENST00000561638 PRSS29PA6NIE9 313 aa15.6■□□□□ 0.09
TMEM249-201ENST00000561638 PSCAO43653 123 aa15.6■□□□□ 0.09
TMEM249-201ENST00000561638 TM2D2Q9BX73 214 aa15.6■□□□□ 0.09
TMEM249-201ENST00000561638 UBE2D1P51668 147 aa15.59■□□□□ 0.09
TMEM249-201ENST00000561638 TAL2Q16559 108 aa15.58■□□□□ 0.08
TMEM249-201ENST00000561638 KMT2CQ8NEZ4 4911 aaKnown RBP15.58■□□□□ 0.08
TMEM249-201ENST00000561638 SACSQ9NZJ4 4579 aa15.56■□□□□ 0.08
TMEM249-201ENST00000561638 TRAV12-1A0A0B4J245 112 aa15.56■□□□□ 0.08
TMEM249-201ENST00000561638 LINC00242Q5T6M2 205 aa15.56■□□□□ 0.08
TMEM249-201ENST00000561638 GEMIN7Q9H840 131 aaKnown RBP15.56■□□□□ 0.08
TMEM249-201ENST00000561638 A0A0J9YXV3 536 aa15.55■□□□□ 0.08
TMEM249-201ENST00000561638 CD164L2Q6UWJ8 174 aa15.54■□□□□ 0.08
TMEM249-201ENST00000561638 RAB37Q96AX2 223 aa15.53■□□□□ 0.08
TMEM249-201ENST00000561638 SPANXB1Q9NS25 103 aaPredicted RBP15.53■□□□□ 0.08
TMEM249-201ENST00000561638 HYDINQ4G0P3 5121 aa15.53■□□□□ 0.08
TMEM249-201ENST00000561638 HERVK_113P63121 156 aa15.52■□□□□ 0.08
TMEM249-201ENST00000561638 CHAC1Q9BUX1 264 aa15.52■□□□□ 0.08
TMEM249-201ENST00000561638 MRPL35Q9NZE8 188 aaKnown RBP15.52■□□□□ 0.07
TMEM249-201ENST00000561638 DNAH6Q9C0G6 4158 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 TINCRA0A1B0GVN0 87 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 F8VRH5 84 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 FOXI1Q12951 378 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 ODF1Q14990 250 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 Q6ZRN7 208 aaPredicted RBP15.51■□□□□ 0.07
TMEM249-201ENST00000561638 TP73-AS1Q9UF72 201 aa15.51■□□□□ 0.07
TMEM249-201ENST00000561638 COX7A2LO14548 114 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms