RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TRGV11A0A075B6L2 103 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 F5H768 121 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 GAS8-AS1O95177 125 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 DEFB130BP0DP73 79 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 DEFB130AP0DP74 79 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 GATA1P15976 413 aaPredicted RBP4.76□□□□□ -1.65
SPG11-224ENST00000561268 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
SPG11-224ENST00000561268 UBE2D3P61077 147 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 UBE2D2P62837 147 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 SLC25A29Q8N8R3 303 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 LINC00588Q9Y4M8 146 aa4.76□□□□□ -1.65
SPG11-224ENST00000561268 NBDYA0A0U1RRE5 68 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 Q6ZTI0 123 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 MTURNQ8N3F0 131 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 C14orf178Q8N769 122 aaPredicted RBP4.75□□□□□ -1.65
SPG11-224ENST00000561268 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 PRADC1Q9BSG0 188 aa4.75□□□□□ -1.65
SPG11-224ENST00000561268 NHP2Q9NX24 153 aaKnown RBP4.75□□□□□ -1.65
SPG11-224ENST00000561268 HSPG2P98160 4391 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 IGLV4-69A0A075B6H9 119 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.74□□□□□ -1.65
SPG11-224ENST00000561268 TRAV26-2A0A0B4J265 109 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 A0A0B4J2C4 111 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 IGHV3-16A0A0C4DH30 117 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 TMEM238C9JI98 176 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 M0QY20 66 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 M0R2N4 97 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 CRYGDP07320 174 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 C1orf134Q5TEV5 83 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 MAPKAPK5-AS1Q8N8E1 139 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
SPG11-224ENST00000561268 IGHV1OR15-1A0A075B7D0 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 A0A096LPF7 62 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 A0A0J9YY99 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 A8MWV9 139 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 I3L3M4 83 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 RHODO00212 210 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 LEPROTO15243 131 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 GAGE7O76087 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 CCL18P55774 89 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 RNF151Q2KHN1 245 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 TTC32Q5I0X7 151 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 Q6ZQT7 251 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 Q6ZRN7 208 aaPredicted RBP4.73□□□□□ -1.65
SPG11-224ENST00000561268 C6orf223Q8N319 242 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 C10orf126Q8N4M7 172 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 RAB37Q96AX2 223 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 DNAJC30Q96LL9 226 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 SIGMAR1Q99720 223 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
SPG11-224ENST00000561268 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 TMEM262E9PQX1 116 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 TIMM17BO60830 172 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 TSHBP01222 138 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 HTN1P15515 57 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 RPL24P83731 157 aaKnown RBP4.72□□□□□ -1.65
SPG11-224ENST00000561268 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 SMAGPQ0VAQ4 97 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 ESRGQ1W209 222 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 RPL39LQ96EH5 51 aaKnown RBP4.72□□□□□ -1.65
SPG11-224ENST00000561268 TIMM21Q9BVV7 248 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 SPANXA1Q9NS26 97 aa4.72□□□□□ -1.65
SPG11-224ENST00000561268 RYR1P21817 5038 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 A4D1N5 150 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 J3QQQ9 107 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 GNRH2O43555 120 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 MGPP08493 103 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 MRPS36P82909 103 aaKnown RBP4.71□□□□□ -1.66
SPG11-224ENST00000561268 SRSF9Q13242 221 aaKnown RBP eCLIP4.71□□□□□ -1.66
SPG11-224ENST00000561268 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 FAM19A3Q7Z5A8 133 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 AMELXQ99217 191 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
SPG11-224ENST00000561268 MRPL16Q9NX20 251 aaKnown RBP4.71□□□□□ -1.66
SPG11-224ENST00000561268 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
SPG11-224ENST00000561268 DNAH5Q8TE73 4624 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms