RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
RABGGTA-221ENST00000561055 C2orf88Q9BSF0 95 aa6.27□□□□□ -1.41
RABGGTA-221ENST00000561055 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 COX7A2LO14548 114 aa6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 FUSP35637 526 aaKnown RBP eCLIP6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 SEC11AP67812 179 aa6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
RABGGTA-221ENST00000561055 LRP1BQ9NZR2 4599 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 A0A087WZ39 114 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 SLPIP03973 132 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 KRTAP10-1P60331 282 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 COX6A2Q02221 97 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 ZC2HC1BQ5TFG8 222 aa6.25□□□□□ -1.41
RABGGTA-221ENST00000561055 hDV102S1A0JD36 115 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 ATP5LO75964 103 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 APOMO95445 188 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 LINC00310P59036 64 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 PMVKQ15126 192 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 BAGE3Q86Y29 109 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 CST9LQ9H4G1 147 aa6.24□□□□□ -1.41
RABGGTA-221ENST00000561055 IGHV3-64A0A075B6Q5 118 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 F8WDY8 70 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BKO60814 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HSBP1O75506 76 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BJP06899 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 MALP21145 153 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BOP23527 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BBP33778 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BDP58876 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BCP62807 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HERVK_113P63121 156 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 PMCHL1Q16048 86 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST2H2BEQ16778 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 Q6ZSA8 131 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 OR10D4PQ8NGN7 298 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BHQ93079 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BNQ99877 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 HIST1H2BMQ99879 126 aa6.23□□□□□ -1.41
RABGGTA-221ENST00000561055 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 SERF1AO75920 110 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 C2orf48Q96LS8 159 aa6.22□□□□□ -1.41
RABGGTA-221ENST00000561055 A0A0J9YXV3 536 aa6.21□□□□□ -1.42
RABGGTA-221ENST00000561055 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
RABGGTA-221ENST00000561055 NUPR1O60356 82 aa6.21□□□□□ -1.42
RABGGTA-221ENST00000561055 IFI27L1Q96BM0 104 aa6.21□□□□□ -1.42
RABGGTA-221ENST00000561055 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 TRAV12-1A0A0B4J245 112 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 IGLC3P0DOY3 106 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 XGP55808 180 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 COA6Q5JTJ3 125 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 FAM19A2Q8N3H0 131 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 GEMIN7Q9H840 131 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
RABGGTA-221ENST00000561055 CIRBPQ14011 172 aaKnown RBP6.19□□□□□ -1.42
RABGGTA-221ENST00000561055 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
RABGGTA-221ENST00000561055 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
RABGGTA-221ENST00000561055 ORAOV1Q8WV07 137 aa6.19□□□□□ -1.42
RABGGTA-221ENST00000561055 PACRGQ96M98 296 aaPredicted RBP6.19□□□□□ -1.42
RABGGTA-221ENST00000561055 HSPG2P98160 4391 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 SPAG11BQ08648 103 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 Q8IZM0 81 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
RABGGTA-221ENST00000561055 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 Q6ZRU5 148 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 LINC00469Q8N7U9 141 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 CAMK2N2Q96S95 79 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 MRPL35Q9NZE8 188 aaKnown RBP6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 PKIGQ9Y2B9 76 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 HERC1Q15751 4861 aa6.17□□□□□ -1.42
RABGGTA-221ENST00000561055 NDUFA1O15239 70 aa6.16□□□□□ -1.42
RABGGTA-221ENST00000561055 NDUFA6P56556 154 aa6.16□□□□□ -1.42
RABGGTA-221ENST00000561055 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
RABGGTA-221ENST00000561055 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
RABGGTA-221ENST00000561055 CHTOPQ9Y3Y2 248 aaKnown RBP6.16□□□□□ -1.42
RABGGTA-221ENST00000561055 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 F8VRH5 84 aa6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 H3BRM9 83 aa6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 TLX1NBP0CAT3 122 aa6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.42
RABGGTA-221ENST00000561055 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 LOC107984640A0A0U1RRK4 108 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 CXCL5P42830 114 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 ODF1Q14990 250 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms