RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 NDUFAF8A1L188 74 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 KNCNA6PVL3 124 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 SMIM1B2RUZ4 78 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 F5H768 121 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 H7C423 109 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 COX7A2LO14548 114 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 SNCGO76070 127 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 INSP01308 110 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 LINC00694P0DN24 101 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 NDUFV3P56181 108 aaKnown RBP1.73□□□□□ -2.13
SPG11-223ENST00000560858 DEFB131AP59861 70 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 HERVK_113P63121 156 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 Q1RN00 199 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 FAM222AQ5U5X8 452 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 CEMP1Q6PRD7 247 aaPredicted RBP1.73□□□□□ -2.13
SPG11-223ENST00000560858 C2orf82Q6UX34 121 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 SOSTDC1Q6X4U4 206 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 SDIM1Q6ZPB5 146 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TEX29Q8N6K0 151 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 DEFB104AQ8WTQ1 72 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 ZNF625Q96I27 306 aaPredicted RBP1.73□□□□□ -2.13
SPG11-223ENST00000560858 CITED2Q99967 270 aaPredicted RBP1.73□□□□□ -2.13
SPG11-223ENST00000560858 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 CDKN2A-AS1Q9UH64 79 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 CEP295Q9C0D2 2601 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 ASPMQ8IZT6 3477 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 ZFHX2Q9C0A1 2572 aaPredicted RBP1.73□□□□□ -2.13
SPG11-223ENST00000560858 CSPG4Q6UVK1 2322 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TACC2O95359 2948 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 DOPEY1Q5JWR5 2465 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 SORL1Q92673 2214 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
SPG11-223ENST00000560858 TRAV25A0A0B4J276 109 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 IGKV2-29A2NJV5 120 aaPredicted RBP1.72□□□□□ -2.13
SPG11-223ENST00000560858 H7C2G1 150 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 K7EQD1 137 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 TRACP01848 142 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 COX6CP09669 75 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 IGHV4-31P0DP07 118 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 HERV-K104P63124 156 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 GAGE2BQ13066 116 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 GAGE5Q13069 117 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 GAGE6Q13070 117 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 GAGE2EQ4V326 116 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 RNASE13Q5GAN3 156 aaKnown RBP1.72□□□□□ -2.13
SPG11-223ENST00000560858 LINC00242Q5T6M2 205 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.72□□□□□ -2.13
SPG11-223ENST00000560858 DAND5Q8N907 189 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 C15orf53Q8NAA6 179 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 LINC00308Q8TCZ7 52 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 COPS9Q8WXC6 57 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 CLEC2BQ92478 149 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 TMEM101Q96IK0 257 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 IMUPQ9GZP8 106 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 PEMTQ9UBM1 199 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 GAGE2DQ9UEU5 116 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 Q9UF83 564 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 CSMD1Q96PZ7 3565 aa1.72□□□□□ -2.13
SPG11-223ENST00000560858 IGHV3-73A0A0B4J1V6 119 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 PLAC8L1A1L4L8 177 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 A8MZ25 164 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 ATP5G1P05496 136 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 ACYP1P07311 99 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 RPL28P46779 137 aaKnown RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 COX6A2Q02221 97 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 DAZ2Q13117 558 aaKnown RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 CIRBPQ14011 172 aaKnown RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 DEFB136Q30KP8 78 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 DEFB114Q30KQ6 69 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 TTC32Q5I0X7 151 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 NTM-AS1Q6ZSK4 140 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 DAZ4Q86SG3 579 aaKnown RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 C1orf158Q8N1D5 194 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 TMEM86BQ8N661 226 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 DYNLRB2Q8TF09 96 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 FAM110AQ9BQ89 295 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 OVOL2Q9BRP0 275 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 Q9H8V8 135 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 DAZ3Q9NR90 486 aaKnown RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 PRR34Q9NV39 138 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 BEX4Q9NWD9 120 aaPredicted RBP1.71□□□□□ -2.14
SPG11-223ENST00000560858 C22orf24Q9Y442 160 aa1.71□□□□□ -2.14
SPG11-223ENST00000560858 ANKRD17O75179 2603 aaKnown RBP1.7□□□□□ -2.14
SPG11-223ENST00000560858 LAMA5O15230 3695 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 IGKV2-28A0A075B6P5 120 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 TRAV13-2A0A0B4J235 113 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 IGHV3-38A0A0C4DH36 116 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 CCDC179H3BU77 68 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 LY6G6DO95868 133 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 IGKV2D-28P01615 120 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 CRPP02741 224 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 GIG44P09565 113 aaPredicted RBP1.7□□□□□ -2.14
SPG11-223ENST00000560858 INAFM2P0DMQ5 153 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 CXCL5P42830 114 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 NPC2P61916 151 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 HIST1H4AP62805 103 aaKnown RBP1.7□□□□□ -2.14
SPG11-223ENST00000560858 MEIG1Q5JSS6 88 aa1.7□□□□□ -2.14
SPG11-223ENST00000560858 C5orf38Q86SI9 138 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms