RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ZNF518AQ6AHZ1 1483 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 Q6JHZ5 121 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 KCNRGQ8N5I3 272 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 TSTD1Q8NFU3 115 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 AMELXQ99217 191 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 SDF2Q99470 211 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 V9GYH0 126 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 C5orf42Q9H799 3197 aa-1.24□□□□□ -2.61
CASC4-210ENST00000559550 RELNP78509 3460 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 COL14A1Q05707 1796 aaKnown RBP-1.25□□□□□ -2.61
CASC4-210ENST00000559550 TRAV13-2A0A0B4J235 113 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 COX6B1P14854 86 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 GUCA1AP43080 201 aaPredicted RBP-1.25□□□□□ -2.61
CASC4-210ENST00000559550 KRTAP20-1Q3LI63 56 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 TMEM170BQ5T4T1 132 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 LENEPQ9Y5L5 61 aa-1.25□□□□□ -2.61
CASC4-210ENST00000559550 KNL1Q8NG31 2342 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 SMG1Q96Q15 3661 aaKnown RBP-1.26□□□□□ -2.61
CASC4-210ENST00000559550 MYH8P13535 1937 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 DEFA5Q01523 94 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 PYDC1Q8WXC3 89 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 AQP10Q96PS8 301 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 TPT1P8Q9HAU6 139 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 WDR7Q9Y4E6 1490 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 DNAH10Q8IVF4 4471 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 TSC2P49815 1807 aa-1.26□□□□□ -2.61
CASC4-210ENST00000559550 DNAJC13O75165 2243 aa-1.27□□□□□ -2.61
CASC4-210ENST00000559550 TTC9CQ8N5M4 171 aa-1.27□□□□□ -2.61
CASC4-210ENST00000559550 ANKRD30AQ9BXX3 1397 aa-1.27□□□□□ -2.61
CASC4-210ENST00000559550 RPS25P62851 125 aaKnown RBP-1.28□□□□□ -2.61
CASC4-210ENST00000559550 COX17Q14061 63 aa-1.28□□□□□ -2.61
CASC4-210ENST00000559550 COPZ1P61923 177 aa-1.29□□□□□ -2.62
CASC4-210ENST00000559550 DPH3Q96FX2 82 aa-1.29□□□□□ -2.62
CASC4-210ENST00000559550 CSMD1Q96PZ7 3565 aa-1.29□□□□□ -2.62
CASC4-210ENST00000559550 REV3LO60673 3130 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 MYO9AB2RTY4 2548 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 TRRAPQ9Y4A5 3859 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 TNFP01375 233 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 HIST1H1DP16402 221 aaKnown RBP-1.3□□□□□ -2.62
CASC4-210ENST00000559550 AKAP14Q86UN6 197 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 LZICQ8WZA0 190 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 ARAP2Q8WZ64 1704 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 DMXL2Q8TDJ6 3036 aa-1.3□□□□□ -2.62
CASC4-210ENST00000559550 DOCK1Q14185 1865 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 Q6AWC8 147 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 DEFB123Q8N688 67 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 TMEM191AQ9H0A3 160 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 FXYD6Q9H0Q3 95 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 COPZ2Q9P299 210 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 ATMQ13315 3056 aa-1.31□□□□□ -2.62
CASC4-210ENST00000559550 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.31□□□□□ -2.62
CASC4-210ENST00000559550 FRYQ5TBA9 3013 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 PPIP5K1Q6PFW1 1433 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 SMCO1Q147U7 214 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 KRTAP19-6Q3LI70 58 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 BAGE2Q86Y30 109 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 Q8N8P6 123 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 TCEAL4Q96EI5 215 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 NDUFA4L2Q9NRX3 87 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 TRANK1O15050 2925 aa-1.32□□□□□ -2.62
CASC4-210ENST00000559550 SPEF2Q9C093 1822 aa-1.33□□□□□ -2.62
CASC4-210ENST00000559550 TLN1Q9Y490 2541 aaKnown RBP-1.33□□□□□ -2.62
CASC4-210ENST00000559550 F8VRH5 84 aa-1.33□□□□□ -2.62
CASC4-210ENST00000559550 M0R2T5 61 aa-1.33□□□□□ -2.62
CASC4-210ENST00000559550 UQCR11O14957 56 aa-1.33□□□□□ -2.62
CASC4-210ENST00000559550 ANP32BQ92688 251 aaKnown RBP-1.33□□□□□ -2.62
CASC4-210ENST00000559550 LSM10Q969L4 123 aaKnown RBP-1.33□□□□□ -2.62
CASC4-210ENST00000559550 KIF21AQ7Z4S6 1674 aa-1.33□□□□□ -2.62
CASC4-210ENST00000559550 TRIOO75962 3097 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 MT1AP04731 61 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 MT1HP80294 61 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 SMIM21Q3B7S5 101 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 SPENQ96T58 3664 aaKnown RBP-1.34□□□□□ -2.62
CASC4-210ENST00000559550 BOD1L1Q8NFC6 3051 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 LRBAP50851 2863 aa-1.34□□□□□ -2.62
CASC4-210ENST00000559550 ADGRG4Q8IZF6 3080 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 SBF2Q86WG5 1849 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 PATJQ8NI35 1801 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 PDCD10Q9BUL8 212 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 MYOM3Q5VTT5 1437 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 FAM186AA6NE01 2351 aa-1.35□□□□□ -2.63
CASC4-210ENST00000559550 PIGBOS1A0A0B4J2F0 54 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 IGLC7A0M8Q6 106 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 H0YAA0 97 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 SPINK4O60575 86 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 MT1XP80297 61 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 DR1Q01658 176 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 CCDC167Q9P0B6 97 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 LINC01558Q9Y6Z2 57 aa-1.36□□□□□ -2.63
CASC4-210ENST00000559550 IQSEC2Q5JU85 1478 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 BICRAQ9NZM4 1560 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 ZFHX3Q15911 3703 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 APOC3P02656 99 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 MT1HL1P0DM35 61 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 MT1GP13640 62 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 TPPP2P59282 170 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 TSLPQ969D9 159 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 GAPVD1Q14C86 1478 aa-1.37□□□□□ -2.63
CASC4-210ENST00000559550 CEP290O15078 2479 aa-1.38□□□□□ -2.63
CASC4-210ENST00000559550 RIMS1Q86UR5 1692 aaKnown RBP-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms