RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
TPM1-217ENST00000559108 C5orf38Q86SI9 138 aa7.08□□□□□ -1.28
TPM1-217ENST00000559108 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
TPM1-217ENST00000559108 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 C16orf90A8MZG2 172 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 C1orf196B1AJZ1 125 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 NPSP0C0P6 89 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 TEX43Q6ZNM6 134 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 FAM19A3Q7Z5A8 133 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 CST9LQ9H4G1 147 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
TPM1-217ENST00000559108 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
TPM1-217ENST00000559108 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
TPM1-217ENST00000559108 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
TPM1-217ENST00000559108 RAB5BP61020 215 aa7.06□□□□□ -1.28
TPM1-217ENST00000559108 VCX2Q9H322 139 aa7.06□□□□□ -1.28
TPM1-217ENST00000559108 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
TPM1-217ENST00000559108 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
TPM1-217ENST00000559108 hDV102S1A0JD36 115 aa7.05□□□□□ -1.28
TPM1-217ENST00000559108 HSBP1O75506 76 aa7.05□□□□□ -1.28
TPM1-217ENST00000559108 Q6ZN92 141 aa7.05□□□□□ -1.28
TPM1-217ENST00000559108 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
TPM1-217ENST00000559108 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.04□□□□□ -1.28
TPM1-217ENST00000559108 COX7A2LO14548 114 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 EREGO14944 169 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 G0S2P27469 103 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 PMVKQ15126 192 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 CDKN2A-AS1Q9UH64 79 aa7.04□□□□□ -1.28
TPM1-217ENST00000559108 A0A087WZ39 114 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 IGHV1-58A0A0C4DH39 117 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 PANO1I0J062 215 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 HAMPP81172 84 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
TPM1-217ENST00000559108 C2orf88Q9BSF0 95 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
TPM1-217ENST00000559108 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 IGLV5-45A0A087WSX0 123 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 IGLC3P0DOY3 106 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 GCSHP23434 173 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
TPM1-217ENST00000559108 KIAA0087Q14695 138 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.29
TPM1-217ENST00000559108 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 ATP5LO75964 103 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 FABP4P15090 132 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 NDUFA6P56556 154 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 C14orf177Q52M58 125 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 ORAOV1Q8WV07 137 aa7.01□□□□□ -1.29
TPM1-217ENST00000559108 RYR1P21817 5038 aa7□□□□□ -1.29
TPM1-217ENST00000559108 SMIM1B2RUZ4 78 aa7□□□□□ -1.29
TPM1-217ENST00000559108 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
TPM1-217ENST00000559108 MALP21145 153 aa7□□□□□ -1.29
TPM1-217ENST00000559108 XGP55808 180 aa7□□□□□ -1.29
TPM1-217ENST00000559108 SPAG11BQ08648 103 aa7□□□□□ -1.29
TPM1-217ENST00000559108 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
TPM1-217ENST00000559108 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
TPM1-217ENST00000559108 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
TPM1-217ENST00000559108 HSPG2P98160 4391 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 HERVK_113P63121 156 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 ODF1Q14990 250 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 Q6ZRU5 148 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 Q6ZSA8 131 aa6.99□□□□□ -1.29
TPM1-217ENST00000559108 MRPL35Q9NZE8 188 aaKnown RBP6.99□□□□□ -1.29
TPM1-217ENST00000559108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
TPM1-217ENST00000559108 TRAV12-1A0A0B4J245 112 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 CHTF8P0CG12 524 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 CFAP161Q6P656 301 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 C2orf82Q6UX34 121 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 LINC00469Q8N7U9 141 aa6.98□□□□□ -1.29
TPM1-217ENST00000559108 GEMIN7Q9H840 131 aaKnown RBP6.98□□□□□ -1.29
TPM1-217ENST00000559108 CHTOPQ9Y3Y2 248 aaKnown RBP6.98□□□□□ -1.29
TPM1-217ENST00000559108 H0Y8G0 127 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 HERC2O95714 4834 aa6.97□□□□□ -1.29
TPM1-217ENST00000559108 F8VRH5 84 aa6.96□□□□□ -1.3
TPM1-217ENST00000559108 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
TPM1-217ENST00000559108 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
TPM1-217ENST00000559108 A0A096LNI7 61 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 APOMO95445 188 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 SEC11AP67812 179 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 HIST3H2BBQ8N257 126 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 C2orf48Q96LS8 159 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 CAMK2N2Q96S95 79 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
TPM1-217ENST00000559108 CDK2AP2O75956 126 aa6.94□□□□□ -1.3
TPM1-217ENST00000559108 C9orf116Q5BN46 136 aaPredicted RBP6.94□□□□□ -1.3
TPM1-217ENST00000559108 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms