RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 SLPIP03973 132 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 NPSP0C0P6 89 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 ERASQ7Z444 233 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
LINC01220-201ENST00000558575 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 S100A1P23297 94 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 COX6A2Q02221 97 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 PMCHL1Q16048 86 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 SERTAD4-AS1Q5TG53 156 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 VCX2Q9H322 139 aa10.07□□□□□ -0.8
LINC01220-201ENST00000558575 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
LINC01220-201ENST00000558575 GCSHP23434 173 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 UBE2D1P51668 147 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 RAB5BP61020 215 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
LINC01220-201ENST00000558575 LINC00310P59036 64 aa10.05□□□□□ -0.8
LINC01220-201ENST00000558575 HAMPP81172 84 aa10.05□□□□□ -0.8
LINC01220-201ENST00000558575 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
LINC01220-201ENST00000558575 TEX43Q6ZNM6 134 aa10.05□□□□□ -0.8
LINC01220-201ENST00000558575 C5orf38Q86SI9 138 aa10.05□□□□□ -0.8
LINC01220-201ENST00000558575 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
LINC01220-201ENST00000558575 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
LINC01220-201ENST00000558575 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
LINC01220-201ENST00000558575 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
LINC01220-201ENST00000558575 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 COX7A2LO14548 114 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 NUPR1O60356 82 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 HBDP02042 147 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 Q6ZN92 141 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
LINC01220-201ENST00000558575 RNF213Q63HN8 5207 aa10.03□□□□□ -0.8
LINC01220-201ENST00000558575 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
LINC01220-201ENST00000558575 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
LINC01220-201ENST00000558575 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
LINC01220-201ENST00000558575 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
LINC01220-201ENST00000558575 CNBPP62633 177 aaKnown RBP10.01□□□□□ -0.81
LINC01220-201ENST00000558575 PAPPA-AS1Q5QFB9 102 aa10.01□□□□□ -0.81
LINC01220-201ENST00000558575 C2orf88Q9BSF0 95 aa10.01□□□□□ -0.81
LINC01220-201ENST00000558575 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
LINC01220-201ENST00000558575 FAM30AQ9NZY2 134 aa10.01□□□□□ -0.81
LINC01220-201ENST00000558575 A0A0J9YXV3 536 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BKO60814 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 SERF1AO75920 110 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BJP06899 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BOP23527 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BBP33778 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BDP58876 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BCP62807 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
LINC01220-201ENST00000558575 FAM19A2Q8N3H0 131 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
LINC01220-201ENST00000558575 A0A087WZ39 114 aa9.99□□□□□ -0.81
LINC01220-201ENST00000558575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
LINC01220-201ENST00000558575 MALP21145 153 aa9.99□□□□□ -0.81
LINC01220-201ENST00000558575 PMVKQ15126 192 aa9.99□□□□□ -0.81
LINC01220-201ENST00000558575 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
LINC01220-201ENST00000558575 HSBP1O75506 76 aa9.97□□□□□ -0.81
LINC01220-201ENST00000558575 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
LINC01220-201ENST00000558575 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.82
LINC01220-201ENST00000558575 ATP5LO75964 103 aa9.96□□□□□ -0.82
LINC01220-201ENST00000558575 Q6ZSA8 131 aa9.96□□□□□ -0.82
LINC01220-201ENST00000558575 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
LINC01220-201ENST00000558575 KIAA0087Q14695 138 aa9.95□□□□□ -0.82
LINC01220-201ENST00000558575 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
LINC01220-201ENST00000558575 IGLV5-45A0A087WSX0 123 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 TINCRA0A1B0GVN0 87 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 APOMO95445 188 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 NDUFA6P56556 154 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 HERVK_113P63121 156 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
LINC01220-201ENST00000558575 PANO1I0J062 215 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 SEC11AP67812 179 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 IFI27L1Q96BM0 104 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
LINC01220-201ENST00000558575 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
LINC01220-201ENST00000558575 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
LINC01220-201ENST00000558575 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
LINC01220-201ENST00000558575 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
LINC01220-201ENST00000558575 Q6ZRU5 148 aa9.92□□□□□ -0.82
LINC01220-201ENST00000558575 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
LINC01220-201ENST00000558575 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
LINC01220-201ENST00000558575 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
LINC01220-201ENST00000558575 LINC00469Q8N7U9 141 aa9.9□□□□□ -0.82
LINC01220-201ENST00000558575 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
LINC01220-201ENST00000558575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms