RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 AP5S1Q9NUS5 200 aa8.09□□□□□ -1.11
LRRC28-206ENST00000558471 HSPG2P98160 4391 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 RYR1P21817 5038 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 UBE2D1P51668 147 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
LRRC28-206ENST00000558471 A0A096LNJ9 63 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 LINC01549A6NIU2 74 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 MALP21145 153 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 RAB5BP61020 215 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 COX6A2Q02221 97 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 C2orf88Q9BSF0 95 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 HERC2O95714 4834 aa8.07□□□□□ -1.12
LRRC28-206ENST00000558471 HAMPP81172 84 aa8.06□□□□□ -1.12
LRRC28-206ENST00000558471 PMCHL1Q16048 86 aa8.06□□□□□ -1.12
LRRC28-206ENST00000558471 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
LRRC28-206ENST00000558471 Q6ZSA8 131 aa8.06□□□□□ -1.12
LRRC28-206ENST00000558471 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
LRRC28-206ENST00000558471 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
LRRC28-206ENST00000558471 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
LRRC28-206ENST00000558471 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
LRRC28-206ENST00000558471 APOMO95445 188 aa8.04□□□□□ -1.12
LRRC28-206ENST00000558471 HBDP02042 147 aa8.04□□□□□ -1.12
LRRC28-206ENST00000558471 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
LRRC28-206ENST00000558471 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
LRRC28-206ENST00000558471 A0A087WZ39 114 aa8.03□□□□□ -1.12
LRRC28-206ENST00000558471 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-206ENST00000558471 PDZD11Q5EBL8 140 aa8.03□□□□□ -1.12
LRRC28-206ENST00000558471 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
LRRC28-206ENST00000558471 CST9LQ9H4G1 147 aa8.03□□□□□ -1.12
LRRC28-206ENST00000558471 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
LRRC28-206ENST00000558471 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
LRRC28-206ENST00000558471 PMVKQ15126 192 aa8.02□□□□□ -1.13
LRRC28-206ENST00000558471 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
LRRC28-206ENST00000558471 ORAOV1Q8WV07 137 aa8.02□□□□□ -1.13
LRRC28-206ENST00000558471 HERVK_113P63121 156 aa8.01□□□□□ -1.13
LRRC28-206ENST00000558471 SEC11AP67812 179 aa8.01□□□□□ -1.13
LRRC28-206ENST00000558471 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
LRRC28-206ENST00000558471 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
LRRC28-206ENST00000558471 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-206ENST00000558471 PANO1I0J062 215 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
LRRC28-206ENST00000558471 Q6ZRU5 148 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 SCXQ7RTU7 201 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 LINC01561Q8N1V8 128 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 Q8N1X5 172 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 C2orf48Q96LS8 159 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 CARD19Q96LW7 228 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 CAMK2N2Q96S95 79 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 GEMIN7Q9H840 131 aaKnown RBP8□□□□□ -1.13
LRRC28-206ENST00000558471 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
LRRC28-206ENST00000558471 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 HSBP1O75506 76 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 ATP5LO75964 103 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 NDUFA6P56556 154 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 LINC00310P59036 64 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 FAM19A2Q8N3H0 131 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 CIRBP-AS1Q8TBR5 109 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
LRRC28-206ENST00000558471 NUPR1O60356 82 aa7.98□□□□□ -1.13
LRRC28-206ENST00000558471 SERF1AO75920 110 aa7.98□□□□□ -1.13
LRRC28-206ENST00000558471 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
LRRC28-206ENST00000558471 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
LRRC28-206ENST00000558471 S100A1P23297 94 aa7.97□□□□□ -1.13
LRRC28-206ENST00000558471 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
LRRC28-206ENST00000558471 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
LRRC28-206ENST00000558471 FAT1Q14517 4588 aa7.97□□□□□ -1.13
LRRC28-206ENST00000558471 IGLV5-45A0A087WSX0 123 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 F8WDY8 70 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 C10orf25Q5T742 122 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 IFI27L1Q96BM0 104 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 DPH3Q96FX2 82 aa7.96□□□□□ -1.14
LRRC28-206ENST00000558471 A0A096LNI7 61 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 NDUFA1O15239 70 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BKO60814 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BJP06899 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BOP23527 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BBP33778 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BDP58876 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BCP62807 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST2H2BEQ16778 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-206ENST00000558471 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BHQ93079 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 PACRGQ96M98 296 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BNQ99877 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 HIST1H2BMQ99879 126 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 MRPL35Q9NZE8 188 aaKnown RBP7.95□□□□□ -1.14
LRRC28-206ENST00000558471 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
LRRC28-206ENST00000558471 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
LRRC28-206ENST00000558471 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
LRRC28-206ENST00000558471 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms