RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 NDUFA1O15239 70 aa11.16□□□□□ -0.62
AP4E1-202ENST00000558439 AMELXQ99217 191 aa11.16□□□□□ -0.62
AP4E1-202ENST00000558439 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
AP4E1-202ENST00000558439 ATP5G1P05496 136 aa11.16□□□□□ -0.62
AP4E1-202ENST00000558439 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
AP4E1-202ENST00000558439 H3BT86 120 aa11.16□□□□□ -0.62
AP4E1-202ENST00000558439 LINC00482Q8N8I6 264 aa11.15□□□□□ -0.62
AP4E1-202ENST00000558439 INAFM2P0DMQ5 153 aa11.15□□□□□ -0.63
AP4E1-202ENST00000558439 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.63
AP4E1-202ENST00000558439 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
AP4E1-202ENST00000558439 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
AP4E1-202ENST00000558439 RNF183Q96D59 192 aa11.14□□□□□ -0.63
AP4E1-202ENST00000558439 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
AP4E1-202ENST00000558439 LECT2O14960 151 aa11.13□□□□□ -0.63
AP4E1-202ENST00000558439 SMR3AQ99954 134 aa11.13□□□□□ -0.63
AP4E1-202ENST00000558439 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
AP4E1-202ENST00000558439 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
AP4E1-202ENST00000558439 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
AP4E1-202ENST00000558439 HRNRQ86YZ3 2850 aaPredicted RBP11.12□□□□□ -0.63
AP4E1-202ENST00000558439 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
AP4E1-202ENST00000558439 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
AP4E1-202ENST00000558439 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 SS18L2Q9UHA2 77 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 COX7A2LO14548 114 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
AP4E1-202ENST00000558439 H7C423 109 aa11.1□□□□□ -0.63
AP4E1-202ENST00000558439 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
AP4E1-202ENST00000558439 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
AP4E1-202ENST00000558439 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
AP4E1-202ENST00000558439 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
AP4E1-202ENST00000558439 APOC4P55056 127 aa11.09□□□□□ -0.63
AP4E1-202ENST00000558439 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
AP4E1-202ENST00000558439 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
AP4E1-202ENST00000558439 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
AP4E1-202ENST00000558439 LST1O00453 97 aa11.08□□□□□ -0.64
AP4E1-202ENST00000558439 BEAN1Q3B7T3 259 aa11.08□□□□□ -0.64
AP4E1-202ENST00000558439 DCHS2Q6V1P9 2916 aa11.07□□□□□ -0.64
AP4E1-202ENST00000558439 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
AP4E1-202ENST00000558439 SLPIP03973 132 aa11.07□□□□□ -0.64
AP4E1-202ENST00000558439 IGLV4-60A0A075B6I1 120 aa11.06□□□□□ -0.64
AP4E1-202ENST00000558439 IGKV3D-7A0A0C4DH55 119 aa11.06□□□□□ -0.64
AP4E1-202ENST00000558439 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
AP4E1-202ENST00000558439 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
AP4E1-202ENST00000558439 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
AP4E1-202ENST00000558439 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
AP4E1-202ENST00000558439 TIMM17BO60830 172 aa11.05□□□□□ -0.64
AP4E1-202ENST00000558439 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
AP4E1-202ENST00000558439 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 CDIP1Q9H305 208 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 NTM-AS1Q6ZSK4 140 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 CLUHP3Q96NS8 147 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 CRYBG3Q68DQ2 2970 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 H0YGX0 51 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 NCR3O14931 201 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 C9orf153Q5TBE3 101 aa11.04□□□□□ -0.64
AP4E1-202ENST00000558439 ORMDL1Q9P0S3 153 aa11.03□□□□□ -0.64
AP4E1-202ENST00000558439 NDUFV3P56181 108 aaKnown RBP11.02□□□□□ -0.64
AP4E1-202ENST00000558439 INAFM1C9JVW0 142 aa11.02□□□□□ -0.65
AP4E1-202ENST00000558439 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
AP4E1-202ENST00000558439 MRPL23Q16540 153 aaKnown RBP11.01□□□□□ -0.65
AP4E1-202ENST00000558439 ATRQ13535 2644 aa11.01□□□□□ -0.65
AP4E1-202ENST00000558439 IGLV1-51P01701 117 aa11.01□□□□□ -0.65
AP4E1-202ENST00000558439 ACYP1P07311 99 aa11□□□□□ -0.65
AP4E1-202ENST00000558439 LINC00959A0A1B0GUT2 108 aa11□□□□□ -0.65
AP4E1-202ENST00000558439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
AP4E1-202ENST00000558439 Q8N2B8 174 aa10.99□□□□□ -0.65
AP4E1-202ENST00000558439 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
AP4E1-202ENST00000558439 CCL18P55774 89 aa10.99□□□□□ -0.65
AP4E1-202ENST00000558439 REG3AQ06141 175 aa10.99□□□□□ -0.65
AP4E1-202ENST00000558439 SPAG11BQ08648 103 aa10.99□□□□□ -0.65
AP4E1-202ENST00000558439 EIF4EBP3O60516 100 aaPredicted RBP10.98□□□□□ -0.65
AP4E1-202ENST00000558439 HAMPP81172 84 aa10.98□□□□□ -0.65
AP4E1-202ENST00000558439 HELZ2Q9BYK8 2649 aaKnown RBP10.98□□□□□ -0.65
AP4E1-202ENST00000558439 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
AP4E1-202ENST00000558439 IBA57-AS1B1ANH7 110 aa10.98□□□□□ -0.65
AP4E1-202ENST00000558439 A0A096LNT2 108 aa10.97□□□□□ -0.65
AP4E1-202ENST00000558439 HILS1P60008 231 aa10.97□□□□□ -0.65
AP4E1-202ENST00000558439 FHL2Q14192 279 aa10.97□□□□□ -0.65
AP4E1-202ENST00000558439 NBEAL2Q6ZNJ1 2754 aa10.97□□□□□ -0.65
AP4E1-202ENST00000558439 FSHBP01225 129 aa10.97□□□□□ -0.65
AP4E1-202ENST00000558439 TRACP01848 142 aa10.96□□□□□ -0.65
AP4E1-202ENST00000558439 DEFB121Q5J5C9 76 aa10.96□□□□□ -0.65
AP4E1-202ENST00000558439 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.65
AP4E1-202ENST00000558439 GCN1Q92616 2671 aaKnown RBP10.96□□□□□ -0.66
AP4E1-202ENST00000558439 PRR3P79522 188 aaKnown RBP10.96□□□□□ -0.66
AP4E1-202ENST00000558439 LY6G6DO95868 133 aa10.95□□□□□ -0.66
AP4E1-202ENST00000558439 CSDC2Q9Y534 153 aaKnown RBP10.95□□□□□ -0.66
AP4E1-202ENST00000558439 SVEP1Q4LDE5 3571 aa10.95□□□□□ -0.66
AP4E1-202ENST00000558439 RPL18AQ02543 176 aaKnown RBP10.95□□□□□ -0.66
AP4E1-202ENST00000558439 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
AP4E1-202ENST00000558439 UBL5Q9BZL1 73 aa10.94□□□□□ -0.66
AP4E1-202ENST00000558439 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
AP4E1-202ENST00000558439 IGKV2D-24A0A075B6R9 120 aa10.94□□□□□ -0.66
AP4E1-202ENST00000558439 LITAFQ99732 161 aa10.94□□□□□ -0.66
AP4E1-202ENST00000558439 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms