RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TM2D3Q9BRN9 247 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 UBE2L6O14933 153 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 SIVA1O15304 175 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 HINT1P49773 126 aaPredicted RBP5.08□□□□□ -1.6
SPG11-204ENST00000557866 TIRAPP58753 221 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 NANOS2P60321 138 aaKnown RBP5.08□□□□□ -1.6
SPG11-204ENST00000557866 DGAT2L7PQ6IED9 249 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 Q6ZTC4 211 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 OR5A1Q8NGJ0 315 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 MRAPQ8TCY5 172 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 C2orf88Q9BSF0 95 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 CHCHD5Q9BSY4 110 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 MGAM2Q2M2H8 2515 aa5.08□□□□□ -1.6
SPG11-204ENST00000557866 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 TRAV13-1A0A0B4J241 112 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 MYMXA0A1B0GTQ4 84 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 ZNF25P17030 456 aaPredicted RBP5.07□□□□□ -1.6
SPG11-204ENST00000557866 BATFQ16520 125 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 DEFB121Q5J5C9 76 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 BVES-AS1Q5T3Y7 98 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 LINC00242Q5T6M2 205 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 AMMECR1LQ6DCA0 310 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 FAM19A3Q7Z5A8 133 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 NBEAL1Q6ZS30 2694 aa5.07□□□□□ -1.6
SPG11-204ENST00000557866 TENM3Q9P273 2699 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 IGHV3-64A0A075B6Q5 118 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 LEPROTO15243 131 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 HERVK_113P61574 105 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 RBX1P62877 108 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 SMAGPQ0VAQ4 97 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 MRPL23Q16540 153 aaKnown RBP5.06□□□□□ -1.6
SPG11-204ENST00000557866 MPV17L2Q567V2 206 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 PLEKHB2Q96CS7 222 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 HIGD1BQ9P298 99 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 CDKN2A-AS1Q9UH64 79 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 ICOSQ9Y6W8 199 aa5.06□□□□□ -1.6
SPG11-204ENST00000557866 TRAV8-3A0A0A6YYJ7 113 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 A0A1B0GUV1 79 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 ZNF815PA8K554 130 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 J3QQQ9 107 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 SPINK8P0C7L1 97 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 LINC00469Q8N7U9 141 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 C11orf45Q8TAV5 145 aa5.05□□□□□ -1.6
SPG11-204ENST00000557866 GEMIN7Q9H840 131 aaKnown RBP5.05□□□□□ -1.6
SPG11-204ENST00000557866 IGHV1-58A0A0C4DH39 117 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 TMEM262E9PQX1 116 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 H3BNG1 76 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 IGHV3-30-3P0DP02 117 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 HSD52Q0P140 79 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 LBHQ53QV2 105 aaPredicted RBP5.04□□□□□ -1.6
SPG11-204ENST00000557866 LELP1Q5T871 98 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 LYPD5Q6UWN5 251 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 SH2D6Q7Z4S9 175 aa5.04□□□□□ -1.6
SPG11-204ENST00000557866 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
SPG11-204ENST00000557866 DEFB131BA0A096LNP1 70 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 IGKV3OR2-268A0A0C4DH90 116 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 IGLV5-39A0A0G2JS06 123 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 A0A1B0GV90 55 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 B5MCH6 92 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 K7EP13 123 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 HERVK_113P63121 156 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 COL5A1-AS1Q5SY13 56 aa5.03□□□□□ -1.6
SPG11-204ENST00000557866 LINC00959A0A1B0GUT2 108 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 SMIM1B2RUZ4 78 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 H3BRM9 83 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 LGALS3P17931 250 aaKnown RBP5.02□□□□□ -1.61
SPG11-204ENST00000557866 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 FXYD2P54710 66 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 SEC11AP67812 179 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 ORAOV1Q8WV07 137 aa5.02□□□□□ -1.61
SPG11-204ENST00000557866 IGHV3OR16-9A0A0B4J2B5 98 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 TAX1BP3O14907 124 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 GCSHP23434 173 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 ESRGQ1W209 222 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 CLPSL2Q6UWE3 100 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 Q6ZVH6 145 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 CEND1Q8N111 149 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 LINC00269Q8N2A0 174 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 TM2D2Q9BX73 214 aa5.01□□□□□ -1.61
SPG11-204ENST00000557866 PRKDCP78527 4128 aaKnown RBP5.01□□□□□ -1.61
SPG11-204ENST00000557866 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
SPG11-204ENST00000557866 A0A0J9YXY3 114 aa5□□□□□ -1.61
SPG11-204ENST00000557866 TAL2Q16559 108 aa5□□□□□ -1.61
SPG11-204ENST00000557866 ZFAND6Q6FIF0 208 aa5□□□□□ -1.61
SPG11-204ENST00000557866 SCGB1D4Q6XE38 83 aa5□□□□□ -1.61
SPG11-204ENST00000557866 HIST1H4GQ99525 98 aa5□□□□□ -1.61
SPG11-204ENST00000557866 LITAFQ99732 161 aa5□□□□□ -1.61
SPG11-204ENST00000557866 B9D2Q9BPU9 175 aa5□□□□□ -1.61
SPG11-204ENST00000557866 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
SPG11-204ENST00000557866 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 A0A087WZ39 114 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 NDUFA1O15239 70 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 CCL25O15444 150 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 ANGP03950 147 aaKnown RBP4.99□□□□□ -1.61
SPG11-204ENST00000557866 XCL1P47992 114 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 C5orf38Q86SI9 138 aa4.99□□□□□ -1.61
SPG11-204ENST00000557866 WFDC10BQ8IUB3 73 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms