RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 LINC00588Q9Y4M8 146 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 HSPG2P98160 4391 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 TINCRA0A1B0GVN0 87 aa7.19□□□□□ -1.26
PRKCH-227ENST00000557599 K7EP13 123 aa7.19□□□□□ -1.26
PRKCH-227ENST00000557599 HERVK_113P63121 156 aa7.19□□□□□ -1.26
PRKCH-227ENST00000557599 KLK12Q9UKR0 248 aa7.19□□□□□ -1.26
PRKCH-227ENST00000557599 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 IGLC3P0DOY3 106 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 UBE2D1P51668 147 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 REG3AQ06141 175 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 TMEM170BQ5T4T1 132 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 LINC00469Q8N7U9 141 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 RMI2Q96E14 147 aa7.18□□□□□ -1.26
PRKCH-227ENST00000557599 TRAV8-4A0A0B4J246 113 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 MIAQ16674 131 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 TTC32Q5I0X7 151 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 NFE4Q86UQ8 179 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 ATOH7Q8N100 152 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 UBE2WQ96B02 151 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 C12orf57Q99622 126 aa7.17□□□□□ -1.26
PRKCH-227ENST00000557599 TRAV8-3A0A0A6YYJ7 113 aa7.16□□□□□ -1.26
PRKCH-227ENST00000557599 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
PRKCH-227ENST00000557599 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
PRKCH-227ENST00000557599 Q9H8V8 135 aa7.16□□□□□ -1.26
PRKCH-227ENST00000557599 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
PRKCH-227ENST00000557599 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
PRKCH-227ENST00000557599 IGLV4-69A0A075B6H9 119 aa7.15□□□□□ -1.26
PRKCH-227ENST00000557599 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
PRKCH-227ENST00000557599 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.26
PRKCH-227ENST00000557599 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 LINC00336Q6ZUF6 198 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 CHCHD10Q8WYQ3 142 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-227ENST00000557599 FAM104AQ969W3 186 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 PRR34Q9NV39 138 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
PRKCH-227ENST00000557599 RTL8CO15255 209 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 APOMO95445 188 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 ZNF22P17026 224 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-227ENST00000557599 MALP21145 153 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 XCL1P47992 114 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 Q8N3U1 123 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 PLEKHB2Q96CS7 222 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 COX11Q9Y6N1 276 aa7.13□□□□□ -1.27
PRKCH-227ENST00000557599 IGLV10-54A0A075B6I4 117 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 IGLV5-45A0A087WSX0 123 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 TSTD3H0UI37 97 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 COX7A2LO14548 114 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 Q6ZR54 194 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 TM2D2Q9BX73 214 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 Q9HAA7 133 aa7.12□□□□□ -1.27
PRKCH-227ENST00000557599 TMEM223A0PJW6 202 aa7.11□□□□□ -1.27
PRKCH-227ENST00000557599 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
PRKCH-227ENST00000557599 NMUP48645 174 aa7.11□□□□□ -1.27
PRKCH-227ENST00000557599 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
PRKCH-227ENST00000557599 STPG4Q8N801 248 aa7.11□□□□□ -1.27
PRKCH-227ENST00000557599 CDKN2A-AS1Q9UH64 79 aa7.11□□□□□ -1.27
PRKCH-227ENST00000557599 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 E9PLD3 99 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 LEPROTO15243 131 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 PRSS2P07478 247 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 SPINK8P0C7L1 97 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
PRKCH-227ENST00000557599 A0A087WZ39 114 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 COX6A2Q02221 97 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 CFAP161Q6P656 301 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
PRKCH-227ENST00000557599 IGHV3-64A0A075B6Q5 118 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 IGHV3OR16-9A0A0B4J2B5 98 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 NBDYA0A0U1RRE5 68 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 PSCAO43653 123 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 MAJINQ3KP22 176 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 ANKRD39Q53RE8 183 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 TOMM7Q9P0U1 55 aa7.08□□□□□ -1.28
PRKCH-227ENST00000557599 J3QQQ9 107 aa7.07□□□□□ -1.28
PRKCH-227ENST00000557599 UQCR10Q9UDW1 63 aa7.07□□□□□ -1.28
PRKCH-227ENST00000557599 ZNF815PA8K554 130 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 SMIM1B2RUZ4 78 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 COX8AP10176 69 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 FOXI1Q12951 378 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 COX7B2Q8TF08 81 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 ORAOV1Q8WV07 137 aa7.06□□□□□ -1.28
PRKCH-227ENST00000557599 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 MYMXA0A1B0GTQ4 84 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 CXCL5P42830 114 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms