RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SAA1P0DJI8 122 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-247ENST00000557311 INAFM2P0DMQ5 153 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 RPL27AP46776 148 aaKnown RBP3.46□□□□□ -1.86
ATXN3-247ENST00000557311 ZNF726P1Q15940 193 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2WQ96B02 151 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 OSTCQ9NRP0 149 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 PKD1P98161 4303 aa3.46□□□□□ -1.86
ATXN3-247ENST00000557311 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 LYRM9A8MSI8 78 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 EPM2AB3EWF7 344 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 E7EUB6 86 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 NDUFA4O00483 81 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 VCYO14598 125 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 SLC25A20O43772 301 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 PCP2Q8IVA1 136 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 SERP2Q8N6R1 65 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 TMEM167AQ8TBQ9 72 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 HIST1H4GQ99525 98 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 TRGV9Q99603 122 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 C11orf1Q9H5F2 150 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 V9GYV3 84 aa3.45□□□□□ -1.86
ATXN3-247ENST00000557311 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 A0A0A6YYD4 124 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2L5PA0A1B0GUS4 154 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 SMIM27A0A1W2PRY6 76 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 TMEM14DPA8MWL7 114 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-247ENST00000557311 LGALS3P17931 250 aaKnown RBP3.44□□□□□ -1.86
ATXN3-247ENST00000557311 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2D3P61077 147 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2D2P62837 147 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 QRFPP83859 136 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 SCGB1D4Q6XE38 83 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
ATXN3-247ENST00000557311 IGKV3-7A0A075B6H7 116 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV1-58A0A0C4DH39 117 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 SPINK4O60575 86 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 FCER1GP30273 86 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 DEFB131AP59861 70 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 SNRPD3P62318 126 aaKnown RBP3.43□□□□□ -1.86
ATXN3-247ENST00000557311 LINC00173Q6ZV60 143 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 LYZL2Q7Z4W2 148 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 LINC00643Q86TS7 51 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 THAP8Q8NA92 274 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 NEXN-AS1Q8NBZ9 246 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 ARHGAP5-AS1Q96IT6 56 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 PAXXQ9BUH6 204 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 WDR83OSQ9Y284 106 aa3.43□□□□□ -1.86
ATXN3-247ENST00000557311 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
ATXN3-247ENST00000557311 TRBV25-1A0A075B6N4 114 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 NDUFS5O43920 106 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 CTSGP08311 255 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 SUB1P53999 127 aaKnown RBP eCLIP3.42□□□□□ -1.86
ATXN3-247ENST00000557311 DAD1P61803 113 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 ERCC8Q13216 396 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 ATXN8Q156A1 80 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
ATXN3-247ENST00000557311 IGLV5-37A0A075B6J1 123 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 INS-IGF2F8WCM5 200 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 UPK2O00526 184 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 UBE2L6O14933 153 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 NPPCP23582 126 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 BRWD1-AS2P59051 145 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 CACNG7P62955 275 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 HBBP68871 147 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 FAM104BQ5XKR9 115 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 C5orf38Q86SI9 138 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 C11orf52Q96A22 123 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 UPK3BQ9BT76 320 aa3.41□□□□□ -1.86
ATXN3-247ENST00000557311 TIMM8BQ9Y5J9 83 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-247ENST00000557311 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms