RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PRO0461Q9UI25 63 aa7.07□□□□□ -1.28
TMEM260-211ENST00000556648 H7C2G1 150 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
TMEM260-211ENST00000556648 PRO1854Q9UHT4 67 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 IGHV3-33P01772 117 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 PRSS2P07478 247 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 PSMB2P49721 201 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 APOC4P55056 127 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 Q9H8V8 135 aa7.06□□□□□ -1.28
TMEM260-211ENST00000556648 A0A0B4J2C4 111 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 A0A0U1RRA0 63 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 H7C423 109 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 IGHV4-30-4P0DP06 118 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 Q8NAQ8 132 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 ATP6V0E2Q8NHE4 81 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
TMEM260-211ENST00000556648 TRRAPQ9Y4A5 3859 aa7.04□□□□□ -1.28
TMEM260-211ENST00000556648 LYRM9A8MSI8 78 aa7.04□□□□□ -1.28
TMEM260-211ENST00000556648 TCL1BO95988 128 aa7.04□□□□□ -1.28
TMEM260-211ENST00000556648 KRTAP24-1Q3LI83 254 aa7.04□□□□□ -1.28
TMEM260-211ENST00000556648 SH2D6Q7Z4S9 175 aa7.04□□□□□ -1.28
TMEM260-211ENST00000556648 TEX48A0A1B0GUV7 120 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 PAX4O43316 350 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 TIMM17BO60830 172 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
TMEM260-211ENST00000556648 OXLD1Q5BKU9 147 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 PRO0255Q9UI72 69 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 ATRQ13535 2644 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 NBEAL2Q6ZNJ1 2754 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 TEP1Q99973 2627 aaKnown RBP7.03□□□□□ -1.28
TMEM260-211ENST00000556648 WIPF1O43516 503 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 CLPSL2Q6UWE3 100 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 Q8N3U1 123 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
TMEM260-211ENST00000556648 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.02□□□□□ -1.29
TMEM260-211ENST00000556648 F8W1H4 67 aa7.02□□□□□ -1.29
TMEM260-211ENST00000556648 DAD1P61803 113 aa7.02□□□□□ -1.29
TMEM260-211ENST00000556648 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
TMEM260-211ENST00000556648 RETNQ9HD89 108 aa7.02□□□□□ -1.29
TMEM260-211ENST00000556648 F8P00451 2351 aa7.02□□□□□ -1.29
TMEM260-211ENST00000556648 K7ERU9 68 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 Q1RN00 199 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 ETDBQ3ZM63 59 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 PRIMA1Q86XR5 153 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 RNF183Q96D59 192 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 G3V4G9 280 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 SCGB1C2P0DMR2 95 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 HTN3P15516 51 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 LINC00308Q8TCZ7 52 aa7.01□□□□□ -1.29
TMEM260-211ENST00000556648 TRAV26-1A0A087WT03 109 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 LINC00959A0A1B0GUT2 108 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 TRIAP1O43715 76 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 MIFP14174 115 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 COX7B2Q8TF08 81 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 VPS25Q9BRG1 176 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 TOMM7Q9P0U1 55 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 MEIG1Q5JSS6 88 aa7□□□□□ -1.29
TMEM260-211ENST00000556648 CYSRT1A8MQ03 144 aa6.99□□□□□ -1.29
TMEM260-211ENST00000556648 IFITM1P13164 125 aa6.99□□□□□ -1.29
TMEM260-211ENST00000556648 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
TMEM260-211ENST00000556648 XCL1P47992 114 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 LYRM7Q5U5X0 104 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 CBY1Q9Y3M2 126 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 ATP5G1P05496 136 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
TMEM260-211ENST00000556648 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
TMEM260-211ENST00000556648 C11orf68Q9H3H3 251 aaKnown RBP6.98□□□□□ -1.29
TMEM260-211ENST00000556648 TRBV20-1A0A075B6N2 111 aa6.97□□□□□ -1.29
TMEM260-211ENST00000556648 A0A087WZ39 114 aa6.97□□□□□ -1.29
TMEM260-211ENST00000556648 A0A1B0GUV1 79 aa6.96□□□□□ -1.29
TMEM260-211ENST00000556648 HERV-K104P63124 156 aa6.96□□□□□ -1.29
TMEM260-211ENST00000556648 LINC00269Q8N2A0 174 aa6.96□□□□□ -1.3
TMEM260-211ENST00000556648 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.3
TMEM260-211ENST00000556648 TRBV30A0A0K0K1B3 111 aa6.95□□□□□ -1.3
TMEM260-211ENST00000556648 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
TMEM260-211ENST00000556648 CLEC2BQ92478 149 aa6.95□□□□□ -1.3
TMEM260-211ENST00000556648 FBN1P35555 2871 aaKnown RBP6.95□□□□□ -1.3
TMEM260-211ENST00000556648 IGLV10-54A0A075B6I4 117 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 C9JAW5 83 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 SS18Q15532 418 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 C3orf56Q8N813 242 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 ANGP03950 147 aaKnown RBP6.94□□□□□ -1.3
TMEM260-211ENST00000556648 ANKRD29Q8N6D5 301 aa6.94□□□□□ -1.3
TMEM260-211ENST00000556648 CARD19Q96LW7 228 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 PFN2P35080 140 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 LINC00158P58513 81 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 EGFEM1PQ0D2K5 195 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 LINC01620Q4KN68 170 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
TMEM260-211ENST00000556648 SLC25A20O43772 301 aa6.92□□□□□ -1.3
TMEM260-211ENST00000556648 REG3AQ06141 175 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms