RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 TRAV8-6A0A0B4J262 113 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 IGLL5B9A064 214 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 ZNF25P17030 456 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-208ENST00000556237 PLNP26678 52 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-208ENST00000556237 PKIAP61925 76 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 RBX1P62877 108 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 ESRGQ1W209 222 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
HIF1A-208ENST00000556237 IGLV4-69A0A075B6H9 119 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 TRAV13-1A0A0B4J241 112 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 IGKV3OR2-268A0A0C4DH90 116 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 C11orf86A6NJI1 115 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 TCTAP57738 103 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 CTAG1AP78358 180 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 TMEM170BQ5T4T1 132 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 C15orf53Q8NAA6 179 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 C14orf144Q96I85 54 aa4.34□□□□□ -1.71
HIF1A-208ENST00000556237 GEMIN7Q9H840 131 aaKnown RBP4.34□□□□□ -1.71
HIF1A-208ENST00000556237 NBEAL2Q6ZNJ1 2754 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 TSTD3H0UI37 97 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 UBE2D1P51668 147 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 COX6A2Q02221 97 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 MPV17L2Q567V2 206 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 MGAM2Q2M2H8 2515 aa4.33□□□□□ -1.72
HIF1A-208ENST00000556237 ANK2Q01484 3957 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 TINCRA0A1B0GVN0 87 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 ANGP03950 147 aaKnown RBP4.32□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV3-30-3P0DP02 117 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-208ENST00000556237 NMUP48645 174 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 HERVK_113P61574 105 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 SEC11AP67812 179 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 SS18Q15532 418 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 LINC00269Q8N2A0 174 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
HIF1A-208ENST00000556237 NOTCH1P46531 2555 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 LINC00959A0A1B0GUT2 108 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 COX8AP10176 69 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 CCL18P55774 89 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 HERVK_113P63121 156 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 LINC00242Q5T6M2 205 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 LINC00469Q8N7U9 141 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
HIF1A-208ENST00000556237 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV3-64A0A075B6Q5 118 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 E9PLD3 99 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 H3BRM9 83 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 REG3AQ06141 175 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 SLC25A34Q6PIV7 304 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 WFDC10BQ8IUB3 73 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 MAPKAPK5-AS1Q8N8E1 139 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 CDKN2A-AS1Q9UH64 79 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
HIF1A-208ENST00000556237 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
HIF1A-208ENST00000556237 TRAV8-3A0A0A6YYJ7 113 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 NUPR2A6NF83 97 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 LEPROTO15243 131 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 CCL25O15444 150 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 SPINK8P0C7L1 97 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 DDTP30046 118 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
HIF1A-208ENST00000556237 C5orf38Q86SI9 138 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 BOD1L2Q8IYS8 172 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 UBE2WQ96B02 151 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
HIF1A-208ENST00000556237 MRPS16Q9Y3D3 137 aaKnown RBP4.29□□□□□ -1.72
HIF1A-208ENST00000556237 IGLV10-54A0A075B6I4 117 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 IGHV1-58A0A0C4DH39 117 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 J3QQQ9 107 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 SIVA1O15304 175 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 DLEU1O43261 78 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
HIF1A-208ENST00000556237 XCL1P47992 114 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 ZFAND6Q6FIF0 208 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 ENHOQ6UWT2 76 aa4.28□□□□□ -1.72
HIF1A-208ENST00000556237 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms