RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 HERVK_113P61574 105 aa5.43□□□□□ -1.54
LINC00641-202ENST00000555688 SEC11AP67812 179 aa5.43□□□□□ -1.54
LINC00641-202ENST00000555688 PLEKHB2Q96CS7 222 aa5.43□□□□□ -1.54
LINC00641-202ENST00000555688 ANK2Q01484 3957 aa5.43□□□□□ -1.54
LINC00641-202ENST00000555688 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 K7EP13 123 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 LEPROTO15243 131 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 FXYD2P54710 66 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 FAM19A3Q7Z5A8 133 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 CELA1Q9UNI1 258 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 TRBV6-8A0A0A6YYG3 113 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 H7C423 109 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 J3QQQ9 107 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 COX6A2Q02221 97 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 TAL2Q16559 108 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 CEND1Q8N111 149 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 VSIG2Q96IQ7 327 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 TMEM243Q9BU79 118 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 PRO0255Q9UI72 69 aa5.42□□□□□ -1.54
LINC00641-202ENST00000555688 IGLV5-45A0A087WSX0 123 aa5.41□□□□□ -1.54
LINC00641-202ENST00000555688 A0A0J9YY99 117 aa5.41□□□□□ -1.54
LINC00641-202ENST00000555688 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
LINC00641-202ENST00000555688 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.54
LINC00641-202ENST00000555688 TRAV8-3A0A0A6YYJ7 113 aa5.4□□□□□ -1.54
LINC00641-202ENST00000555688 G3V4G9 280 aa5.4□□□□□ -1.54
LINC00641-202ENST00000555688 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
LINC00641-202ENST00000555688 ATP6V0E2Q8NHE4 81 aa5.4□□□□□ -1.54
LINC00641-202ENST00000555688 IGHV1-58A0A0C4DH39 117 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 A6NDN8 102 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 H3BRM9 83 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 DAD1P61803 113 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 OR5A1Q8NGJ0 315 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 UBE2L6O14933 153 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 LGALS3P17931 250 aaKnown RBP5.39□□□□□ -1.55
LINC00641-202ENST00000555688 GAGE6Q13070 117 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 HIST1H4GQ99525 98 aa5.39□□□□□ -1.55
LINC00641-202ENST00000555688 NOTCH1P46531 2555 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 ATP5G1P05496 136 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 SMAGPQ0VAQ4 97 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 AMMECR1LQ6DCA0 310 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 SCGB1D4Q6XE38 83 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 C10orf126Q8N4M7 172 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
LINC00641-202ENST00000555688 RETNQ9HD89 108 aa5.38□□□□□ -1.55
LINC00641-202ENST00000555688 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
LINC00641-202ENST00000555688 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 IGLV5-39A0A0G2JS06 123 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 HERVK_113P63121 156 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 C12orf74Q32Q52 190 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 CHCHD5Q9BSY4 110 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 TENM3Q9P273 2699 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 A0A096LPF7 62 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 F5H768 121 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 K7ERJ3 54 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
LINC00641-202ENST00000555688 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 A0A0J9YXY3 114 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 CCL25O15444 150 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 IGHV3-30P01768 117 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 IGHV3-30-5P0DP03 117 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 ZFAND6Q6FIF0 208 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 RAB37Q96AX2 223 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 LITAFQ99732 161 aa5.36□□□□□ -1.55
LINC00641-202ENST00000555688 NHP2Q9NX24 153 aaKnown RBP5.36□□□□□ -1.55
LINC00641-202ENST00000555688 SRSF9Q13242 221 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC00641-202ENST00000555688 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
LINC00641-202ENST00000555688 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
LINC00641-202ENST00000555688 TEX48A0A1B0GUV7 120 aa5.34□□□□□ -1.55
LINC00641-202ENST00000555688 H3BUT2 72 aa5.34□□□□□ -1.55
LINC00641-202ENST00000555688 RBX1P62877 108 aa5.34□□□□□ -1.55
LINC00641-202ENST00000555688 VAMP3Q15836 100 aa5.34□□□□□ -1.55
LINC00641-202ENST00000555688 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.56
LINC00641-202ENST00000555688 HTN3P15516 51 aa5.34□□□□□ -1.56
LINC00641-202ENST00000555688 MRPL23Q16540 153 aaKnown RBP5.34□□□□□ -1.56
LINC00641-202ENST00000555688 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.56
LINC00641-202ENST00000555688 C11orf68Q9H3H3 251 aaKnown RBP5.34□□□□□ -1.56
LINC00641-202ENST00000555688 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
LINC00641-202ENST00000555688 IGLL5B9A064 214 aa5.33□□□□□ -1.56
LINC00641-202ENST00000555688 TMEM262E9PQX1 116 aa5.33□□□□□ -1.56
LINC00641-202ENST00000555688 NDUFA1O15239 70 aa5.33□□□□□ -1.56
LINC00641-202ENST00000555688 NTN5Q8WTR8 489 aaPredicted RBP5.33□□□□□ -1.56
LINC00641-202ENST00000555688 IGKV3OR2-268A0A0C4DH90 116 aa5.32□□□□□ -1.56
LINC00641-202ENST00000555688 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
LINC00641-202ENST00000555688 PRB2P02812 416 aaPredicted RBP5.32□□□□□ -1.56
LINC00641-202ENST00000555688 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
LINC00641-202ENST00000555688 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms