RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 OPRPNQ99935 248 aaPredicted RBP6.46□□□□□ -1.38
ACTN1-215ENST00000555616 CDC42SE2Q9NRR3 84 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 IGLV4-60A0A075B6I1 120 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 A0A087WTM6 91 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 IBA57-AS1B1ANH7 110 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 CRPP02741 224 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
ACTN1-215ENST00000555616 EREGO14944 169 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 ODF1Q14990 250 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 RNASE13Q5GAN3 156 aaKnown RBP6.44□□□□□ -1.38
ACTN1-215ENST00000555616 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 LINC00269Q8N2A0 174 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 Q8N3U1 123 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 AMELXQ99217 191 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
ACTN1-215ENST00000555616 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 CCL25O15444 150 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 DPM2O94777 84 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 PLNP26678 52 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 SEC11AP67812 179 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 REG3AQ06141 175 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 FAM104AQ969W3 186 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 HSPG2P98160 4391 aa6.43□□□□□ -1.38
ACTN1-215ENST00000555616 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 F8VRH5 84 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 IGKCP01834 107 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 SS18Q15532 418 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 MIAQ16674 131 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 CFAP161Q6P656 301 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 CLPSL2Q6UWE3 100 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 MRPL35Q9NZE8 188 aaKnown RBP6.42□□□□□ -1.38
ACTN1-215ENST00000555616 CHTOPQ9Y3Y2 248 aaKnown RBP6.42□□□□□ -1.38
ACTN1-215ENST00000555616 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
ACTN1-215ENST00000555616 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
ACTN1-215ENST00000555616 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 TRAV8-4A0A0B4J246 113 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 UBE2D1P51668 147 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 ZC2HC1BQ5TFG8 222 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 GEMIN7Q9H840 131 aaKnown RBP6.41□□□□□ -1.38
ACTN1-215ENST00000555616 Q9HAA7 133 aa6.41□□□□□ -1.38
ACTN1-215ENST00000555616 LINC00959A0A1B0GUT2 108 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 PSCAO43653 123 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 DDTP30046 118 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 RMI2Q96E14 147 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 MIEN1Q9BRT3 115 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 CHAC1Q9BUX1 264 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
ACTN1-215ENST00000555616 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
ACTN1-215ENST00000555616 HERVK_113P63121 156 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 FAM19A3Q7Z5A8 133 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 TM2D2Q9BX73 214 aa6.39□□□□□ -1.39
ACTN1-215ENST00000555616 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 XCL1P47992 114 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 LINC00242Q5T6M2 205 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 MAPKAPK5-AS1Q8N8E1 139 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 NTN5Q8WTR8 489 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-215ENST00000555616 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-215ENST00000555616 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
ACTN1-215ENST00000555616 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 C11orf86A6NJI1 115 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 H3BRM9 83 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 ANKRD39Q53RE8 183 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 STPG4Q8N801 248 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 Q8N814 137 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
ACTN1-215ENST00000555616 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 GAGE12HA6NDE8 117 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 LINC00587B1AMM8 73 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 COX7A2LO14548 114 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 COX8AP10176 69 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 WFDC2Q14508 124 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 SLC25A34Q6PIV7 304 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 Q8N1X5 172 aa6.36□□□□□ -1.39
ACTN1-215ENST00000555616 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 DLEU1O43261 78 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms