RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
TUBB3-209ENST00000555609 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
TUBB3-209ENST00000555609 PF4P02776 101 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 C16orf95Q9H693 158 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 TRAV13-1A0A0B4J241 112 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE12JA6NER3 117 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE4Q13068 117 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE5Q13069 117 aa11.51□□□□□ -0.57
TUBB3-209ENST00000555609 ITPR3Q14573 2671 aa11.5□□□□□ -0.57
TUBB3-209ENST00000555609 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
TUBB3-209ENST00000555609 DAND5Q8N907 189 aa11.49□□□□□ -0.57
TUBB3-209ENST00000555609 NOP10Q9NPE3 64 aaKnown RBP11.49□□□□□ -0.57
TUBB3-209ENST00000555609 TRACP01848 142 aa11.49□□□□□ -0.57
TUBB3-209ENST00000555609 ACYP1P07311 99 aa11.49□□□□□ -0.57
TUBB3-209ENST00000555609 GAGE6Q13070 117 aa11.49□□□□□ -0.57
TUBB3-209ENST00000555609 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
TUBB3-209ENST00000555609 GIG44P09565 113 aaPredicted RBP11.48□□□□□ -0.57
TUBB3-209ENST00000555609 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
TUBB3-209ENST00000555609 FLNAP21333 2647 aaKnown RBP11.47□□□□□ -0.57
TUBB3-209ENST00000555609 TRAV13-2A0A0B4J235 113 aa11.46□□□□□ -0.57
TUBB3-209ENST00000555609 A0A1W2PRX2 142 aa11.46□□□□□ -0.57
TUBB3-209ENST00000555609 PLAC8L1A1L4L8 177 aa11.46□□□□□ -0.57
TUBB3-209ENST00000555609 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.57
TUBB3-209ENST00000555609 ACANP16112 2415 aa11.46□□□□□ -0.57
TUBB3-209ENST00000555609 TRGV2A0A075B6R0 118 aa11.46□□□□□ -0.58
TUBB3-209ENST00000555609 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.58
TUBB3-209ENST00000555609 NDUFA7O95182 113 aa11.45□□□□□ -0.58
TUBB3-209ENST00000555609 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
TUBB3-209ENST00000555609 RNASE1P07998 156 aaKnown RBP11.44□□□□□ -0.58
TUBB3-209ENST00000555609 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 ZANQ9Y493 2812 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 TTC32Q5I0X7 151 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 COX7B2Q8TF08 81 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
TUBB3-209ENST00000555609 GAGE7O76087 117 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 HIST2H2BDQ6DRA6 164 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 HIVEP1P15822 2718 aa11.43□□□□□ -0.58
TUBB3-209ENST00000555609 TRGV4A0A0C4DH28 118 aa11.42□□□□□ -0.58
TUBB3-209ENST00000555609 LINC01006Q8NI28 216 aa11.42□□□□□ -0.58
TUBB3-209ENST00000555609 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
TUBB3-209ENST00000555609 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
TUBB3-209ENST00000555609 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
TUBB3-209ENST00000555609 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
TUBB3-209ENST00000555609 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
TUBB3-209ENST00000555609 CRLF1O75462 422 aa11.41□□□□□ -0.58
TUBB3-209ENST00000555609 F8P00451 2351 aa11.4□□□□□ -0.58
TUBB3-209ENST00000555609 A0A0U1RRA0 63 aa11.4□□□□□ -0.59
TUBB3-209ENST00000555609 FHL2Q14192 279 aa11.4□□□□□ -0.59
TUBB3-209ENST00000555609 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
TUBB3-209ENST00000555609 CRPP02741 224 aa11.39□□□□□ -0.59
TUBB3-209ENST00000555609 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
TUBB3-209ENST00000555609 TRBV7-7A0A0K0K1E9 115 aa11.38□□□□□ -0.59
TUBB3-209ENST00000555609 RPL35AP18077 110 aaKnown RBP11.38□□□□□ -0.59
TUBB3-209ENST00000555609 KIR2DL5BQ8NHK3 375 aa11.38□□□□□ -0.59
TUBB3-209ENST00000555609 IMUPQ9GZP8 106 aa11.38□□□□□ -0.59
TUBB3-209ENST00000555609 A0A087WZ39 114 aa11.38□□□□□ -0.59
TUBB3-209ENST00000555609 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
TUBB3-209ENST00000555609 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
TUBB3-209ENST00000555609 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
TUBB3-209ENST00000555609 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 INAFM2P0DMQ5 153 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 LINC01561Q8N1V8 128 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 H0YGX0 51 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
TUBB3-209ENST00000555609 MTORP42345 2549 aa11.35□□□□□ -0.59
TUBB3-209ENST00000555609 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
TUBB3-209ENST00000555609 IGLV4-60A0A075B6I1 120 aa11.34□□□□□ -0.59
TUBB3-209ENST00000555609 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
TUBB3-209ENST00000555609 LINC00158P58513 81 aa11.33□□□□□ -0.6
TUBB3-209ENST00000555609 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
TUBB3-209ENST00000555609 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
TUBB3-209ENST00000555609 WFDC10AQ9H1F0 79 aa11.33□□□□□ -0.6
TUBB3-209ENST00000555609 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 SDIM1Q6ZPB5 146 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 IGKV2-28A0A075B6P5 120 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 SMIM9A6NGZ8 99 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 IGKV2D-28P01615 120 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 SMR3AQ99954 134 aa11.32□□□□□ -0.6
TUBB3-209ENST00000555609 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
TUBB3-209ENST00000555609 MALP21145 153 aa11.31□□□□□ -0.6
TUBB3-209ENST00000555609 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
TUBB3-209ENST00000555609 CCL18P55774 89 aa11.3□□□□□ -0.6
TUBB3-209ENST00000555609 HILS1P60008 231 aa11.3□□□□□ -0.6
TUBB3-209ENST00000555609 FAM218AQ96MZ4 157 aa11.3□□□□□ -0.6
TUBB3-209ENST00000555609 SS18Q15532 418 aa11.29□□□□□ -0.6
TUBB3-209ENST00000555609 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
TUBB3-209ENST00000555609 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms