RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	RB1CC1	Q8TDY2	1594 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	KDM3B	Q7LBC6	1761 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	RAPGEF6	Q8TEU7	1601 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506		A0A0G2JND7	137 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	FAM223B	A6NKX1	122 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	PIN1P1	O15428	100 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	SAA2	P0DJI9	122 aa	Predicted RBP	0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	C9orf62	Q8N4C0	152 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	PLCE1	Q9P212	2302 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	ANKRD17	O75179	2603 aa	Known RBP	0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	MUC5AC	P98088	5654 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	F8	P00451	2351 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	SYS1-DBNDD2	H3BUS1	97 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	MGP	P08493	103 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	NMB	P08949	121 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506		Q9H521	79 aa		0.78	□□□□□ -2.28
KTN1-222	ENST00000555506	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	0.78	□□□□□ -2.29
KTN1-222	ENST00000555506	FSIP2	Q5CZC0	6907 aa		0.78	□□□□□ -2.29
KTN1-222	ENST00000555506	SCRIB	Q14160	1630 aa		0.77	□□□□□ -2.29
KTN1-222	ENST00000555506	NRXN1	Q9ULB1	1477 aa		0.77	□□□□□ -2.29
KTN1-222	ENST00000555506	TRBV25-1	A0A075B6N4	114 aa		0.77	□□□□□ -2.29
KTN1-222	ENST00000555506		M0R3E3	92 aa		0.77	□□□□□ -2.29
KTN1-222	ENST00000555506	FAU	P35544	74 aa	Known RBP	0.77	□□□□□ -2.29
KTN1-222	ENST00000555506	ARHGEF12	Q9NZN5	1544 aa		0.77	□□□□□ -2.29
KTN1-222	ENST00000555506	GYPA	P02724	150 aa		0.76	□□□□□ -2.29
KTN1-222	ENST00000555506	C20orf78	Q9BR46	151 aa		0.76	□□□□□ -2.29
KTN1-222	ENST00000555506	MON2	Q7Z3U7	1717 aa		0.76	□□□□□ -2.29
KTN1-222	ENST00000555506	NEB	P20929	6669 aa		0.75	□□□□□ -2.29
KTN1-222	ENST00000555506	C2CD3	Q4AC94	2353 aa		0.75	□□□□□ -2.29
KTN1-222	ENST00000555506	MEGF8	Q7Z7M0	2845 aa		0.75	□□□□□ -2.29
KTN1-222	ENST00000555506	EPRS	P07814	1512 aa	Known RBP	0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	TTC28	Q96AY4	2481 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	SPINK7	P58062	85 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	PMCHL1	Q16048	86 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	UBE2DNL	Q8IWF7	75 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	TMEM263	Q8WUH6	116 aa	Known RBP	0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	LINC00846	Q9NV44	126 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	BDP1	A6H8Y1	2624 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	SPTBN2	O15020	2390 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	UNC13B	O14795	1591 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	NUP188	Q5SRE5	1749 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	FANCA	O15360	1455 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	MED14	O60244	1454 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	LAMC1	P11047	1609 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	RGPD4	Q7Z3J3	1758 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506	ABCC3	O15438	1527 aa		0.74	□□□□□ -2.29
KTN1-222	ENST00000555506		A0A1B0GWA3	101 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	UQCRH	P07919	91 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	PYY3	Q5JQD4	70 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	CEP162	Q5TB80	1403 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506		Q6JHZ5	121 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	SSBP3-AS1	Q7Z2R9	100 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	MYH4	Q9Y623	1939 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	LRP6	O75581	1613 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	CLTC	Q00610	1675 aa	Known RBP	0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	DOPEY2	Q9Y3R5	2298 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	UQCRHL	A0A096LP55	91 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	HAMP	P81172	84 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	PSMG4	Q5JS54	123 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	PRO1933	Q9H354	126 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	HIGD1B	Q9P298	99 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	FRAS1	Q86XX4	4008 aa		0.73	□□□□□ -2.29
KTN1-222	ENST00000555506	POLQ	O75417	2590 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	CACNA1E	Q15878	2313 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	DST	Q03001	7570 aa	Known RBP	0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	C7orf77	A4D0Y5	90 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	ZNF815P	A8K554	130 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506		K7EP34	96 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	C10orf113	Q5VZT2	155 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	ATP10B	O94823	1461 aa		0.72	□□□□□ -2.29
KTN1-222	ENST00000555506	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.71	□□□□□ -2.3
KTN1-222	ENST00000555506	PLAC8	Q9NZF1	115 aa		0.71	□□□□□ -2.3
KTN1-222	ENST00000555506	KCP	Q6ZWJ8	1503 aa		0.71	□□□□□ -2.3
KTN1-222	ENST00000555506	UBR1	Q8IWV7	1749 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	IQSEC2	Q5JU85	1478 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	NLRP1	Q9C000	1473 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	ABCA12	Q86UK0	2595 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	PPL	O60437	1756 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	TENM3	Q9P273	2699 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506		A0A087WVE0	104 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	BCE1	O60756	84 aa		0.7	□□□□□ -2.3
KTN1-222	ENST00000555506	POLA1	P09884	1462 aa	Predicted RBP	0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	C1orf167	Q5SNV9	1468 aa		0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	APC	P25054	2843 aa		0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	ABCC2	Q92887	1545 aa		0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	LCN9	Q8WX39	176 aa		0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	EDC4	Q6P2E9	1401 aa	Known RBP	0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	MYO3A	Q8NEV4	1616 aa		0.69	□□□□□ -2.3
KTN1-222	ENST00000555506	URB1	O60287	2271 aa	Known RBP	0.68	□□□□□ -2.3
KTN1-222	ENST00000555506		F8WEM9	126 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	ARMS2	P0C7Q2	107 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	FDCSP	Q8NFU4	85 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	PSENEN	Q9NZ42	101 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	PLIN4	Q96Q06	1357 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	ERCC6L2	Q5T890	1561 aa		0.68	□□□□□ -2.3
KTN1-222	ENST00000555506	HMGN3	Q15651	99 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	TDRG1	Q3Y452	100 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	ETDB	Q3ZM63	59 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	LINC01600	Q96MT4	127 aa		0.67	□□□□□ -2.3
KTN1-222	ENST00000555506	USF3	Q68DE3	2245 aa		0.67	□□□□□ -2.3

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