RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 FSHBP01225 129 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 DEFB136Q30KP8 78 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 F5H768 121 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 J3KT08 172 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 DNAL4O96015 105 aa11.44□□□□□ -0.58
MARK3-209ENST00000555235 C2orf48Q96LS8 159 aa11.43□□□□□ -0.58
MARK3-209ENST00000555235 INSP01308 110 aa11.43□□□□□ -0.58
MARK3-209ENST00000555235 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
MARK3-209ENST00000555235 Q9HAA7 133 aa11.43□□□□□ -0.58
MARK3-209ENST00000555235 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
MARK3-209ENST00000555235 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
MARK3-209ENST00000555235 RPL36ALQ969Q0 106 aaKnown RBP11.41□□□□□ -0.58
MARK3-209ENST00000555235 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.58
MARK3-209ENST00000555235 CDC42SE2Q9NRR3 84 aa11.4□□□□□ -0.58
MARK3-209ENST00000555235 USP9YO00507 2555 aaPredicted RBP11.4□□□□□ -0.58
MARK3-209ENST00000555235 RPL18AQ02543 176 aaKnown RBP11.39□□□□□ -0.59
MARK3-209ENST00000555235 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
MARK3-209ENST00000555235 H0YGX0 51 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 RPS28P62857 69 aaKnown RBP11.38□□□□□ -0.59
MARK3-209ENST00000555235 Q6JHZ5 121 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 SND1-IT1Q9HBX3 110 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
MARK3-209ENST00000555235 CENPEQ02224 2701 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 CREBBPQ92793 2442 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 K7EQD1 137 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
MARK3-209ENST00000555235 MIR7-3HGQ8N6C7 128 aa11.37□□□□□ -0.59
MARK3-209ENST00000555235 OBSCN-AS1Q96MR7 158 aa11.37□□□□□ -0.59
MARK3-209ENST00000555235 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
MARK3-209ENST00000555235 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
MARK3-209ENST00000555235 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
MARK3-209ENST00000555235 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
MARK3-209ENST00000555235 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
MARK3-209ENST00000555235 C4orf3Q8WVX3 66 aa11.36□□□□□ -0.59
MARK3-209ENST00000555235 Q96MF0 132 aa11.36□□□□□ -0.59
MARK3-209ENST00000555235 C14orf132Q9NPU4 83 aa11.36□□□□□ -0.59
MARK3-209ENST00000555235 A0A087WYN8 130 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 DYNLRB2Q8TF09 96 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 UBE2L6O14933 153 aa11.35□□□□□ -0.59
MARK3-209ENST00000555235 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
MARK3-209ENST00000555235 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
MARK3-209ENST00000555235 ZANQ9Y493 2812 aa11.34□□□□□ -0.59
MARK3-209ENST00000555235 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
MARK3-209ENST00000555235 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
MARK3-209ENST00000555235 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
MARK3-209ENST00000555235 TMEM258P61165 79 aa11.33□□□□□ -0.6
MARK3-209ENST00000555235 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
MARK3-209ENST00000555235 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
MARK3-209ENST00000555235 LINC00846Q9NV44 126 aa11.32□□□□□ -0.6
MARK3-209ENST00000555235 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
MARK3-209ENST00000555235 LINC00158P58513 81 aa11.32□□□□□ -0.6
MARK3-209ENST00000555235 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
MARK3-209ENST00000555235 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
MARK3-209ENST00000555235 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
MARK3-209ENST00000555235 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 LECT2O14960 151 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 OR13C6PQ8NH95 151 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
MARK3-209ENST00000555235 CCL18P55774 89 aa11.29□□□□□ -0.6
MARK3-209ENST00000555235 CSMD2Q7Z408 3487 aa11.29□□□□□ -0.6
MARK3-209ENST00000555235 ANKRD17O75179 2603 aaKnown RBP11.28□□□□□ -0.6
MARK3-209ENST00000555235 HECTD1Q9ULT8 2610 aa11.28□□□□□ -0.6
MARK3-209ENST00000555235 FBN2P35556 2912 aa11.28□□□□□ -0.6
MARK3-209ENST00000555235 Q6ZTI0 123 aa11.28□□□□□ -0.6
MARK3-209ENST00000555235 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
MARK3-209ENST00000555235 USP17L23D6RBM5 183 aa11.27□□□□□ -0.61
MARK3-209ENST00000555235 STHQ8IWL8 128 aa11.27□□□□□ -0.61
MARK3-209ENST00000555235 UPK3BQ9BT76 320 aa11.27□□□□□ -0.61
MARK3-209ENST00000555235 CR1P17927 2039 aa11.27□□□□□ -0.61
MARK3-209ENST00000555235 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 CYSTM1Q9H1C7 97 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 NCR3O14931 201 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
MARK3-209ENST00000555235 A0A087WVE0 104 aa11.25□□□□□ -0.61
MARK3-209ENST00000555235 NBPF19A0A087WUL8 3843 aa11.25□□□□□ -0.61
MARK3-209ENST00000555235 PAX4O43316 350 aa11.25□□□□□ -0.61
MARK3-209ENST00000555235 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
MARK3-209ENST00000555235 POLQO75417 2590 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 LY6G6DO95868 133 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 CCKP06307 115 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 ATP5EP2Q5VTU8 51 aa11.24□□□□□ -0.61
MARK3-209ENST00000555235 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
MARK3-209ENST00000555235 A0A087WZ39 114 aa11.22□□□□□ -0.61
MARK3-209ENST00000555235 JMJD7-PLA2G4BH0Y9G9 81 aa11.22□□□□□ -0.61
MARK3-209ENST00000555235 PFN2P35080 140 aa11.22□□□□□ -0.61
MARK3-209ENST00000555235 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
MARK3-209ENST00000555235 IGKV3OR2-268A0A0C4DH90 116 aa11.21□□□□□ -0.62
MARK3-209ENST00000555235 SLPIP03973 132 aa11.2□□□□□ -0.62
MARK3-209ENST00000555235 SS18Q15532 418 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 551.1 ms