RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
ARHGEF40-206ENST00000555232 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
ARHGEF40-206ENST00000555232 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
ARHGEF40-206ENST00000555232 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 S100A7L2Q5SY68 101 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 TRAV25A0A0B4J276 109 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 TSHBP01222 138 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 POLR2KP53803 58 aaKnown RBP8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 C9orf85Q96MD7 179 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 ZMAT4Q9H898 229 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
ARHGEF40-206ENST00000555232 NDUFA11Q86Y39 141 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 TEX49A0A1B0GTD5 131 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 LINC00694P0DN24 101 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 SS18Q15532 418 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 OTOGQ6ZRI0 2925 aa8.84□□□□□ -0.99
ARHGEF40-206ENST00000555232 RS1O15537 224 aa8.83□□□□□ -1
ARHGEF40-206ENST00000555232 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
ARHGEF40-206ENST00000555232 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
ARHGEF40-206ENST00000555232 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
ARHGEF40-206ENST00000555232 MED14OSP0DP75 135 aa8.82□□□□□ -1
ARHGEF40-206ENST00000555232 ATP5G1P05496 136 aa8.82□□□□□ -1
ARHGEF40-206ENST00000555232 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
ARHGEF40-206ENST00000555232 IGLV1-51P01701 117 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 SPATA3Q8NHX4 192 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 CR1P17927 2039 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 IGKV2D-24A0A075B6R9 120 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 LEPROTO15243 131 aa8.81□□□□□ -1
ARHGEF40-206ENST00000555232 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
ARHGEF40-206ENST00000555232 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 TIMM17AQ99595 171 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 ATXN8Q156A1 80 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
ARHGEF40-206ENST00000555232 IGLV2-18A0A075B6J9 118 aa8.79□□□□□ -1
ARHGEF40-206ENST00000555232 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
ARHGEF40-206ENST00000555232 PRO0255Q9UI72 69 aa8.79□□□□□ -1
ARHGEF40-206ENST00000555232 PIK3CD-AS1Q5SR53 167 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 ODF3Q96PU9 254 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 CFC1BP0CG36 223 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 CFC1P0CG37 223 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 HERVK_113P63121 156 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 FSHBP01225 129 aa8.78□□□□□ -1
ARHGEF40-206ENST00000555232 DAZ2Q13117 558 aaKnown RBP8.78□□□□□ -1
ARHGEF40-206ENST00000555232 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
ARHGEF40-206ENST00000555232 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
ARHGEF40-206ENST00000555232 TRAV12-1A0A0B4J245 112 aa8.77□□□□□ -1
ARHGEF40-206ENST00000555232 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1
ARHGEF40-206ENST00000555232 UBE2D3P61077 147 aa8.77□□□□□ -1
ARHGEF40-206ENST00000555232 UBE2D2P62837 147 aa8.77□□□□□ -1
ARHGEF40-206ENST00000555232 POM121L12Q8N7R1 296 aa8.77□□□□□ -1
ARHGEF40-206ENST00000555232 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1
ARHGEF40-206ENST00000555232 TENM1Q9UKZ4 2725 aa8.77□□□□□ -1.01
ARHGEF40-206ENST00000555232 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
ARHGEF40-206ENST00000555232 COX8CQ7Z4L0 72 aa8.77□□□□□ -1.01
ARHGEF40-206ENST00000555232 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
ARHGEF40-206ENST00000555232 LINC00315P59091 139 aa8.77□□□□□ -1.01
ARHGEF40-206ENST00000555232 LECT2O14960 151 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 VWFP04275 2813 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 FAM236AA0A1B0GUQ0 79 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 FAM236BA0A1B0GV22 79 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 UBE2D1P51668 147 aa8.76□□□□□ -1.01
ARHGEF40-206ENST00000555232 GAGE2AQ6NT46 116 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 CLEC2BQ92478 149 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 LAMTOR3Q9UHA4 124 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 MIR7-3HGQ8N6C7 128 aa8.75□□□□□ -1.01
ARHGEF40-206ENST00000555232 COX6A2Q02221 97 aa8.74□□□□□ -1.01
ARHGEF40-206ENST00000555232 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
ARHGEF40-206ENST00000555232 PSCAO43653 123 aa8.74□□□□□ -1.01
ARHGEF40-206ENST00000555232 Q8N3U1 123 aa8.74□□□□□ -1.01
ARHGEF40-206ENST00000555232 PDZD2O15018 2839 aa8.74□□□□□ -1.01
ARHGEF40-206ENST00000555232 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 IGHV1-58A0A0C4DH39 117 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 CSDC2Q9Y534 153 aaKnown RBP8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 UBE2D4Q9Y2X8 147 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 TRBV6-8A0A0A6YYG3 113 aa8.73□□□□□ -1.01
ARHGEF40-206ENST00000555232 KRTAP10-3P60369 221 aa8.72□□□□□ -1.01
ARHGEF40-206ENST00000555232 Q8N2B8 174 aa8.72□□□□□ -1.01
ARHGEF40-206ENST00000555232 HIST1H4AP62805 103 aaKnown RBP8.72□□□□□ -1.01
ARHGEF40-206ENST00000555232 KRTAP1-1Q07627 177 aa8.72□□□□□ -1.01
ARHGEF40-206ENST00000555232 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.01
ARHGEF40-206ENST00000555232 C5orf47Q569G3 176 aa8.71□□□□□ -1.01
ARHGEF40-206ENST00000555232 ZNF575Q86XF7 245 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms