RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
NEDD1-207ENST00000555114 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
NEDD1-207ENST00000555114 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
NEDD1-207ENST00000555114 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
NEDD1-207ENST00000555114 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
NEDD1-207ENST00000555114 UBE2BP63146 152 aa9.38□□□□□ -0.91
NEDD1-207ENST00000555114 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
NEDD1-207ENST00000555114 V9GYV3 84 aa9.38□□□□□ -0.91
NEDD1-207ENST00000555114 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 A0A1B0GW15 77 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 CKS2P33552 79 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
NEDD1-207ENST00000555114 TRBV24-1A0A075B6N3 115 aa9.36□□□□□ -0.91
NEDD1-207ENST00000555114 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
NEDD1-207ENST00000555114 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
NEDD1-207ENST00000555114 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
NEDD1-207ENST00000555114 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
NEDD1-207ENST00000555114 LPAP08519 4548 aa9.35□□□□□ -0.91
NEDD1-207ENST00000555114 M0QXV9 152 aa9.35□□□□□ -0.91
NEDD1-207ENST00000555114 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
NEDD1-207ENST00000555114 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
NEDD1-207ENST00000555114 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
NEDD1-207ENST00000555114 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
NEDD1-207ENST00000555114 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
NEDD1-207ENST00000555114 S100A8P05109 93 aa9.34□□□□□ -0.91
NEDD1-207ENST00000555114 SRP19P09132 144 aaKnown RBP9.34□□□□□ -0.91
NEDD1-207ENST00000555114 PRR4Q16378 134 aa9.34□□□□□ -0.91
NEDD1-207ENST00000555114 FAM74A3Q4VXF1 159 aa9.34□□□□□ -0.91
NEDD1-207ENST00000555114 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
NEDD1-207ENST00000555114 F8W036 122 aa9.33□□□□□ -0.92
NEDD1-207ENST00000555114 IFI27P40305 119 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-207ENST00000555114 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-207ENST00000555114 AKAP14Q86UN6 197 aa9.32□□□□□ -0.92
NEDD1-207ENST00000555114 KRTAP11-1Q8IUC1 163 aa9.32□□□□□ -0.92
NEDD1-207ENST00000555114 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 D6R8Y8 96 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 PPBPP02775 128 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 RAB5AP20339 215 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 ADIRFQ15847 76 aa9.31□□□□□ -0.92
NEDD1-207ENST00000555114 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
NEDD1-207ENST00000555114 RPL23P62829 140 aaKnown RBP9.3□□□□□ -0.92
NEDD1-207ENST00000555114 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
NEDD1-207ENST00000555114 NAT8Q9UHE5 227 aa9.3□□□□□ -0.92
NEDD1-207ENST00000555114 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
NEDD1-207ENST00000555114 C2orf88Q9BSF0 95 aa9.28□□□□□ -0.92
NEDD1-207ENST00000555114 PYGO1Q9Y3Y4 419 aa9.28□□□□□ -0.92
NEDD1-207ENST00000555114 NUPR1O60356 82 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 NPYP01303 97 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 PRSS2P07478 247 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
NEDD1-207ENST00000555114 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 LINC01561Q8N1V8 128 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
NEDD1-207ENST00000555114 ZNF861PO60384 105 aa9.26□□□□□ -0.93
NEDD1-207ENST00000555114 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
NEDD1-207ENST00000555114 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
NEDD1-207ENST00000555114 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
NEDD1-207ENST00000555114 IGLV4-3A0A075B6K6 122 aa9.25□□□□□ -0.93
NEDD1-207ENST00000555114 CKS1BP61024 79 aa9.25□□□□□ -0.93
NEDD1-207ENST00000555114 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
NEDD1-207ENST00000555114 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
NEDD1-207ENST00000555114 Q6ZN92 141 aa9.25□□□□□ -0.93
NEDD1-207ENST00000555114 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
NEDD1-207ENST00000555114 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
NEDD1-207ENST00000555114 PRELID3AQ96N28 172 aa9.23□□□□□ -0.93
NEDD1-207ENST00000555114 PEA15Q15121 130 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
NEDD1-207ENST00000555114 ATP5L2Q7Z4Y8 100 aa9.21□□□□□ -0.94
NEDD1-207ENST00000555114 VCX2Q9H322 139 aa9.21□□□□□ -0.94
NEDD1-207ENST00000555114 CYSLTR1Q9Y271 337 aa9.21□□□□□ -0.94
NEDD1-207ENST00000555114 LAMTOR2Q9Y2Q5 125 aa9.21□□□□□ -0.94
NEDD1-207ENST00000555114 TSPAN13O95857 204 aa9.2□□□□□ -0.94
NEDD1-207ENST00000555114 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
NEDD1-207ENST00000555114 Q8IZM0 81 aa9.2□□□□□ -0.94
NEDD1-207ENST00000555114 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
NEDD1-207ENST00000555114 MAP1LC3AQ9H492 121 aa9.2□□□□□ -0.94
NEDD1-207ENST00000555114 LINC00469Q8N7U9 141 aa9.19□□□□□ -0.94
NEDD1-207ENST00000555114 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-207ENST00000555114 MUC2Q02817 5179 aa9.19□□□□□ -0.94
NEDD1-207ENST00000555114 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 LOC389332A0A1B0GUA5 103 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 C9JQL5 133 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 NPSP0C0P6 89 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 CRYGAP11844 174 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 SEC11AP67812 179 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 TP73-AS1Q9UF72 201 aa9.18□□□□□ -0.94
NEDD1-207ENST00000555114 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms