RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 K7EIL1 84 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 SPINT3P49223 89 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 PSMG4Q5JS54 123 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 PLIN4Q96Q06 1357 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 ROS1P08922 2347 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 MAP3K1Q13233 1512 aa1.8□□□□□ -2.12
VRK1-203ENST00000555067 Q6ZRX8 168 aa1.79□□□□□ -2.12
VRK1-203ENST00000555067 SMIM4Q8WVI0 70 aa1.79□□□□□ -2.12
VRK1-203ENST00000555067 NLRP1Q9C000 1473 aa1.79□□□□□ -2.12
VRK1-203ENST00000555067 DNMBPQ6XZF7 1577 aa1.79□□□□□ -2.12
VRK1-203ENST00000555067 KIF14Q15058 1648 aa1.78□□□□□ -2.12
VRK1-203ENST00000555067 RRBP1Q9P2E9 1410 aaKnown RBP1.78□□□□□ -2.12
VRK1-203ENST00000555067 ZNF815PA8K554 130 aa1.78□□□□□ -2.12
VRK1-203ENST00000555067 COX17Q14061 63 aa1.78□□□□□ -2.12
VRK1-203ENST00000555067 PRR15LQ9BU68 103 aa1.78□□□□□ -2.12
VRK1-203ENST00000555067 G3V318 75 aa1.77□□□□□ -2.13
VRK1-203ENST00000555067 MGPP08493 103 aa1.77□□□□□ -2.13
VRK1-203ENST00000555067 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
VRK1-203ENST00000555067 NUP188Q5SRE5 1749 aa1.77□□□□□ -2.13
VRK1-203ENST00000555067 ERVK-7P63135 1459 aa1.76□□□□□ -2.13
VRK1-203ENST00000555067 CCDC141Q6ZP82 1450 aa1.76□□□□□ -2.13
VRK1-203ENST00000555067 A0A1B0GWA3 101 aa1.76□□□□□ -2.13
VRK1-203ENST00000555067 GCHFRP30047 84 aa1.76□□□□□ -2.13
VRK1-203ENST00000555067 CCDC180Q9P1Z9 1646 aa1.76□□□□□ -2.13
VRK1-203ENST00000555067 CLIP1P30622 1438 aa1.75□□□□□ -2.13
VRK1-203ENST00000555067 DIP2BQ9P265 1576 aa1.75□□□□□ -2.13
VRK1-203ENST00000555067 KDM5DQ9BY66 1539 aa1.75□□□□□ -2.13
VRK1-203ENST00000555067 SUPT6HQ7KZ85 1726 aaKnown RBP1.74□□□□□ -2.13
VRK1-203ENST00000555067 MYH4Q9Y623 1939 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 MAP3K4Q9Y6R4 1608 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 C7orf77A4D0Y5 90 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 F8WEM9 126 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 ETDBQ3ZM63 59 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 ZNF720Q7Z2F6 126 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 FDCSPQ8NFU4 85 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 S100A13Q99584 98 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 RABAC1Q9UI14 185 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 SPCS1Q9Y6A9 102 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 LAMA4Q16363 1823 aa1.74□□□□□ -2.13
VRK1-203ENST00000555067 RAPGEF6Q8TEU7 1601 aa1.73□□□□□ -2.13
VRK1-203ENST00000555067 A0A087WVE0 104 aa1.73□□□□□ -2.13
VRK1-203ENST00000555067 BCE1O60756 84 aa1.73□□□□□ -2.13
VRK1-203ENST00000555067 LRRC37A2A6NM11 1700 aa1.73□□□□□ -2.13
VRK1-203ENST00000555067 EEA1Q15075 1411 aa1.73□□□□□ -2.13
VRK1-203ENST00000555067 CADP27708 2225 aa1.72□□□□□ -2.13
VRK1-203ENST00000555067 ABCC2Q92887 1545 aa1.72□□□□□ -2.13
VRK1-203ENST00000555067 PSENENQ9NZ42 101 aa1.72□□□□□ -2.13
VRK1-203ENST00000555067 THOC2Q8NI27 1593 aaKnown RBP1.72□□□□□ -2.13
VRK1-203ENST00000555067 ZFHX3Q15911 3703 aa1.71□□□□□ -2.13
VRK1-203ENST00000555067 FXYD6P3P58550 94 aa1.71□□□□□ -2.14
VRK1-203ENST00000555067 KRTAP10-4P60372 401 aaPredicted RBP1.71□□□□□ -2.14
VRK1-203ENST00000555067 KRTAP21-3Q3LHN1 58 aa1.71□□□□□ -2.14
VRK1-203ENST00000555067 ALKAL2Q6UX46 152 aa1.71□□□□□ -2.14
VRK1-203ENST00000555067 IQSEC2Q5JU85 1478 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 CACNA1CQ13936 2221 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 ARMS2P0C7Q2 107 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 ADAMTS12P58397 1594 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 SMIM11AP58511 58 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 DEFA5Q01523 94 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 WFDC2Q14508 124 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 NMSQ5H8A3 153 aa1.7□□□□□ -2.14
VRK1-203ENST00000555067 DNAJC13O75165 2243 aa1.69□□□□□ -2.14
VRK1-203ENST00000555067 ST20Q9HBF5 79 aa1.69□□□□□ -2.14
VRK1-203ENST00000555067 NEXMIFQ5QGS0 1516 aa1.69□□□□□ -2.14
VRK1-203ENST00000555067 CCDC88BA6NC98 1476 aa1.69□□□□□ -2.14
VRK1-203ENST00000555067 KNDC1Q76NI1 1749 aa1.69□□□□□ -2.14
VRK1-203ENST00000555067 JMJD1CQ15652 2540 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 HMGN2P05204 90 aaKnown RBP1.68□□□□□ -2.14
VRK1-203ENST00000555067 SNRPFP62306 86 aaKnown RBP1.68□□□□□ -2.14
VRK1-203ENST00000555067 ADIRFQ15847 76 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 Q6JHZ5 121 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 SMCO4Q9NRQ5 59 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 TENM1Q9UKZ4 2725 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
VRK1-203ENST00000555067 NAV3Q8IVL0 2385 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 PDCD5O14737 125 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 HAMPP81172 84 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 TMEM263Q8WUH6 116 aaKnown RBP1.67□□□□□ -2.14
VRK1-203ENST00000555067 S100ZQ8WXG8 99 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 PROK2Q9HC23 129 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
VRK1-203ENST00000555067 LRRIQ1Q96JM4 1722 aa1.66□□□□□ -2.14
VRK1-203ENST00000555067 HMGN3Q15651 99 aa1.66□□□□□ -2.14
VRK1-203ENST00000555067 C10orf113Q5VZT2 155 aa1.66□□□□□ -2.14
VRK1-203ENST00000555067 KDM3BQ7LBC6 1761 aa1.65□□□□□ -2.14
VRK1-203ENST00000555067 HELZ2Q9BYK8 2649 aaKnown RBP1.65□□□□□ -2.15
VRK1-203ENST00000555067 C1orf167Q5SNV9 1468 aa1.65□□□□□ -2.15
VRK1-203ENST00000555067 PIN1P1O15428 100 aa1.65□□□□□ -2.15
VRK1-203ENST00000555067 LEPROTL1O95214 131 aa1.65□□□□□ -2.15
VRK1-203ENST00000555067 TMEM131LA2VDJ0 1609 aa1.65□□□□□ -2.15
VRK1-203ENST00000555067 MAGI3Q5TCQ9 1506 aa1.65□□□□□ -2.15
VRK1-203ENST00000555067 SHPRHQ149N8 1683 aa1.64□□□□□ -2.15
VRK1-203ENST00000555067 ZC3H13Q5T200 1668 aaKnown RBP1.64□□□□□ -2.15
VRK1-203ENST00000555067 INO80Q9ULG1 1556 aaPredicted RBP1.64□□□□□ -2.15
VRK1-203ENST00000555067 PLXNB2O15031 1838 aa1.64□□□□□ -2.15
VRK1-203ENST00000555067 IQCF6A8MYZ5 107 aa1.64□□□□□ -2.15
VRK1-203ENST00000555067 D6R8Y8 96 aa1.64□□□□□ -2.15
VRK1-203ENST00000555067 ARL14EPLP0DKL9 152 aa1.64□□□□□ -2.15
VRK1-203ENST00000555067 GNGT1P63211 74 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms