RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GNG5P63218 68 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 RPL19P84098 196 aaKnown RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 Q0VG73 95 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 TPRXLQ17RH7 258 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 CENPWQ5EE01 88 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 C1orf194Q5T5A4 169 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 PATE2Q6UY27 113 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 CYP2G1PQ6ZSU1 146 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 BPIFA4PQ86YQ2 179 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 OR5C1Q8NGR4 320 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 DIRC1Q969H9 104 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 DIRAS2Q96HU8 199 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 NMES1Q9C002 83 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SLC39A9Q9NUM3 307 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2L5PA0A1B0GUS4 154 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV6-4A0A1B0GX49 114 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 GRIFINA4D1Z8 144 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 C9orf92A6NGG3 77 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 ERICH4A6NGS2 130 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 HMGB3O15347 200 aaKnown RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 CD3DP04234 171 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 FABP1P07148 127 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 SULT1A3P0DMM9 295 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 SULT1A4P0DMN0 295 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 LINC00694P0DN24 101 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 SDC2P34741 201 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 RPL5P46777 297 aaKnown RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 RANP62826 216 aaKnown RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 MSMO1Q15800 293 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 MIAQ16674 131 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 KRTAP19-2Q3LHN2 52 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 DNAL1Q4LDG9 190 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 PCOTHQ58A44 107 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 RNASE10Q5GAN6 216 aaKnown RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 NMSQ5H8A3 153 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 C10orf113Q5VZT2 155 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 MIC13Q5XKP0 118 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 EIF5AL1Q6IS14 154 aaKnown RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 Q6ZS49 121 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 BOD1L2Q8IYS8 172 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 C8orf59Q8N0T1 100 aaPredicted RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 DAND5Q8N907 189 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 BORCS5Q969J3 196 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 CARD19Q96LW7 228 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 TRGV9Q99603 122 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 MGLLQ99685 303 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.63□□□□□ -2.31
PRPF39-208ENST00000554785 TIMM9Q9Y5J7 89 aa0.63□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV19A0A075B6N1 114 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV6-8A0A0A6YYG3 113 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 A0A0A6YYH2 397 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 DUXBA0A1W2PPF3 345 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 A6NJ64 397 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 SMLR1H3BR10 107 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 PDCD5O14737 125 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 MGPP08493 103 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 IGLC2P0DOY2 106 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ZNF80P51504 273 aaPredicted RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 S100A10P60903 97 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2D3P61077 147 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 CNBPP62633 177 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 SMCO1Q147U7 214 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 GOLT1AQ6ZVE7 132 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ASB13Q8WXK3 278 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 SMIM12Q96EX1 92 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 DERL1Q9BUN8 251 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 C9orf16Q9BUW7 83 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 MIXL1Q9H2W2 232 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 TXNL4BQ9NX01 149 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 COMMD3Q9UBI1 195 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 LSM2Q9Y333 95 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 U3KQ87 197 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV7-3A0A075B6L6 115 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV25-1A0A075B6N4 114 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 A0A087WWC5 75 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 IGKV2-29A2NJV5 120 aaPredicted RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 LINC00862A6NCI5 91 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 FAM25AB3EWG3 89 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 FAM25CB3EWG5 89 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 FAM25GB3EWG6 89 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2L6O14933 153 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 CST7O76096 145 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ARL14EPLP0DKL9 152 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 HIST1H1EP10412 219 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 RNASE3P12724 160 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2L3P68036 154 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 PRLHP81277 87 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 MLLT11Q13015 90 aaPredicted RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 PPP1R1AQ13522 171 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ELOBQ15370 118 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ASB16-AS1Q495Z4 193 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 MRPL51Q4U2R6 128 aaKnown RBP0.62□□□□□ -2.31
PRPF39-208ENST00000554785 KRTAP26-1Q6PEX3 210 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 SCGB1D4Q6XE38 83 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 MIR17HGQ75NE6 70 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 IQCF2Q8IXL9 164 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 CNBD2Q96M20 576 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 CIB3Q96Q77 187 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms