RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 MALP21145 153 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 C4orf3Q8WVX3 66 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 ESM1Q9NQ30 184 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
AL049839.2-201ENST00000553947 DNAJC9-AS1A6NH13 148 aa6.55□□□□□ -1.36
AL049839.2-201ENST00000553947 INAFM2P0DMQ5 153 aa6.55□□□□□ -1.36
AL049839.2-201ENST00000553947 HTN1P15515 57 aa6.55□□□□□ -1.36
AL049839.2-201ENST00000553947 MIAQ16674 131 aa6.55□□□□□ -1.36
AL049839.2-201ENST00000553947 ANK3Q12955 4377 aaKnown RBP6.54□□□□□ -1.36
AL049839.2-201ENST00000553947 HIST1H4AP62805 103 aaKnown RBP6.54□□□□□ -1.36
AL049839.2-201ENST00000553947 LINC00336Q6ZUF6 198 aa6.54□□□□□ -1.36
AL049839.2-201ENST00000553947 A8MZ25 164 aa6.54□□□□□ -1.36
AL049839.2-201ENST00000553947 F8WDY8 70 aa6.54□□□□□ -1.36
AL049839.2-201ENST00000553947 M0QY20 66 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 KRTAP1-1Q07627 177 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 A0A1W2PRX2 142 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 ZNF415Q09FC8 603 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 DEFB114Q30KQ6 69 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 TMEM86BQ8N661 226 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 LITAFQ99732 161 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 MAP6D1Q9H9H5 199 aa6.53□□□□□ -1.36
AL049839.2-201ENST00000553947 A8MTW9 85 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 COX7A2LO14548 114 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 ACANP16112 2415 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 PROK1P58294 105 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 DYNLRB2Q8TF09 96 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
AL049839.2-201ENST00000553947 IGHV3-73A0A0B4J1V6 119 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 CD28P10747 220 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 Q9HAA7 133 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 A0A0U1RQV1 116 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 PLA2G2AP14555 144 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 SEC61GP60059 68 aa6.51□□□□□ -1.37
AL049839.2-201ENST00000553947 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 Q9UF83 564 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 FHL2Q14192 279 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
AL049839.2-201ENST00000553947 FAM236DA0A1B0GTK5 79 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 FAM236CP0DP71 79 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 ODF3L2Q3SX64 289 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 NIPBLQ6KC79 2804 aaeCLIP6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 PRIMA1Q86XR5 153 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 V9GYY9 64 aa6.49□□□□□ -1.37
AL049839.2-201ENST00000553947 Q6ZSN1 163 aa6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 C20orf203Q8NBC4 194 aa6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 CCL24O00175 119 aa6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 KMT2BQ9UMN6 2715 aaPredicted RBP6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 HELZ2Q9BYK8 2649 aaKnown RBP6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 GHRHP01286 108 aa6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 LINC01006Q8NI28 216 aa6.48□□□□□ -1.37
AL049839.2-201ENST00000553947 TRAV23DV6A0A075B6W5 121 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 J3QKU1 62 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 NDUFC2O95298 119 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 LINC01561Q8N1V8 128 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 C11orf72Q8NBR9 251 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 XCL2Q9UBD3 114 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 MTORP42345 2549 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 VSIG2Q96IQ7 327 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
AL049839.2-201ENST00000553947 SMR3AQ99954 134 aa6.46□□□□□ -1.38
AL049839.2-201ENST00000553947 Q6JHZ5 121 aa6.46□□□□□ -1.38
AL049839.2-201ENST00000553947 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
AL049839.2-201ENST00000553947 INSP01308 110 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 HILS1P60008 231 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 UNC79Q9P2D8 2635 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 IGHV3OR16-12A0A075B7B8 117 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 RNASE1P07998 156 aaKnown RBP6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 C1orf158Q8N1D5 194 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 WFDC9Q8NEX5 89 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
AL049839.2-201ENST00000553947 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 STHQ8IWL8 128 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 Q9H8V8 135 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 LINC00467Q9BRT7 94 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
AL049839.2-201ENST00000553947 SETXQ7Z333 2677 aaKnown RBP6.43□□□□□ -1.38
AL049839.2-201ENST00000553947 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
AL049839.2-201ENST00000553947 FASNP49327 2511 aaKnown RBP6.43□□□□□ -1.38
AL049839.2-201ENST00000553947 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms