RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 UBE2L6O14933 153 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 LINC00694P0DN24 101 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 DEFB130BP0DP73 79 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 DEFB130AP0DP74 79 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-209ENST00000553659 TNP2Q05952 138 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 TMEM101Q96IK0 257 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 PRO0255Q9UI72 69 aa11.04□□□□□ -0.64
ACTN1-209ENST00000553659 TMEM223A0PJW6 202 aa11.03□□□□□ -0.64
ACTN1-209ENST00000553659 C16orf90A8MZG2 172 aa11.03□□□□□ -0.64
ACTN1-209ENST00000553659 LEPROTO15243 131 aa11.03□□□□□ -0.64
ACTN1-209ENST00000553659 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-209ENST00000553659 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-209ENST00000553659 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
ACTN1-209ENST00000553659 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
ACTN1-209ENST00000553659 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
ACTN1-209ENST00000553659 TIRAPP58753 221 aa11.02□□□□□ -0.65
ACTN1-209ENST00000553659 FAM19A3Q7Z5A8 133 aa11.02□□□□□ -0.65
ACTN1-209ENST00000553659 A0A0J9YXV3 536 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 ZNF815PA8K554 130 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 H3BRM9 83 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
ACTN1-209ENST00000553659 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 Q6ZUT4 128 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
ACTN1-209ENST00000553659 F5H768 121 aa11□□□□□ -0.65
ACTN1-209ENST00000553659 NTM-AS1Q6ZSK4 140 aa11□□□□□ -0.65
ACTN1-209ENST00000553659 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
ACTN1-209ENST00000553659 FAM104AQ969W3 186 aa11□□□□□ -0.65
ACTN1-209ENST00000553659 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
ACTN1-209ENST00000553659 J3QQQ9 107 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 ATP5G1P05496 136 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 UBE2D1P51668 147 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 CCL18P55774 89 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 HERVK_113P63121 156 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 TM2D2Q9BX73 214 aa10.99□□□□□ -0.65
ACTN1-209ENST00000553659 TRBV6-8A0A0A6YYG3 113 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 CEND1Q8N111 149 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 LINC00588Q9Y4M8 146 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
ACTN1-209ENST00000553659 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 TRAV26-1A0A087WT03 109 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 GYPEP15421 78 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 SH2D6Q7Z4S9 175 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
ACTN1-209ENST00000553659 IGHV1-58A0A0C4DH39 117 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 A6NJY4 79 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 PAX4O43316 350 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 GCSHP23434 173 aa10.96□□□□□ -0.65
ACTN1-209ENST00000553659 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-209ENST00000553659 TAX1BP3O14907 124 aa10.95□□□□□ -0.66
ACTN1-209ENST00000553659 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
ACTN1-209ENST00000553659 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
ACTN1-209ENST00000553659 HSPG2P98160 4391 aa10.95□□□□□ -0.66
ACTN1-209ENST00000553659 Q9H8V8 135 aa10.94□□□□□ -0.66
ACTN1-209ENST00000553659 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
ACTN1-209ENST00000553659 Q8N1X5 172 aa10.93□□□□□ -0.66
ACTN1-209ENST00000553659 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
ACTN1-209ENST00000553659 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
ACTN1-209ENST00000553659 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
ACTN1-209ENST00000553659 A0A0J9YY99 117 aa10.91□□□□□ -0.66
ACTN1-209ENST00000553659 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
ACTN1-209ENST00000553659 IGHV3-30-3P0DP02 117 aa10.91□□□□□ -0.66
ACTN1-209ENST00000553659 SRSF9Q13242 221 aaKnown RBP eCLIP10.91□□□□□ -0.66
ACTN1-209ENST00000553659 LINC00242Q5T6M2 205 aa10.91□□□□□ -0.66
ACTN1-209ENST00000553659 A0A1B0GUV1 79 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 CCL25O15444 150 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 FXYD2P54710 66 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 GAGE6Q13070 117 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
ACTN1-209ENST00000553659 TTC32Q5I0X7 151 aa10.9□□□□□ -0.66
ACTN1-209ENST00000553659 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
ACTN1-209ENST00000553659 Q6ZVH6 145 aa10.89□□□□□ -0.67
ACTN1-209ENST00000553659 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
ACTN1-209ENST00000553659 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
ACTN1-209ENST00000553659 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
ACTN1-209ENST00000553659 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
ACTN1-209ENST00000553659 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
ACTN1-209ENST00000553659 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 IGLV5-39A0A0G2JS06 123 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 A0A1B0GWB2 263 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 H3BNG1 76 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 TIMM17BO60830 172 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 VAMP3Q15836 100 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 ESRGQ1W209 222 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 NDUFA12Q9UI09 145 aa10.87□□□□□ -0.67
ACTN1-209ENST00000553659 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
ACTN1-209ENST00000553659 NHP2Q9NX24 153 aaKnown RBP10.86□□□□□ -0.67
ACTN1-209ENST00000553659 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
ACTN1-209ENST00000553659 NDUFA1O15239 70 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms