RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 C18orf65Q6ZTR6 163 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 BRK1Q8WUW1 75 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 ZNF73O43830 326 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-208ENST00000553289 NAV3Q8IVL0 2385 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
SYNE2-208ENST00000553289 A0A096LNI7 61 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 Q6JHZ5 121 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 WFDC10AQ9H1F0 79 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 ODF3L2Q3SX64 289 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 Q6Q795 121 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
SYNE2-208ENST00000553289 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
SYNE2-208ENST00000553289 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
SYNE2-208ENST00000553289 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
SYNE2-208ENST00000553289 ATRXP46100 2492 aa8.37□□□□□ -1.07
SYNE2-208ENST00000553289 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-208ENST00000553289 CACNA1AO00555 2505 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 COX7CP15954 63 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 SORL1Q92673 2214 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 AVPP01185 164 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 EGFEM1PQ0D2K5 195 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 WFDC10BQ8IUB3 73 aa8.36□□□□□ -1.07
SYNE2-208ENST00000553289 SMIM1B2RUZ4 78 aa8.35□□□□□ -1.07
SYNE2-208ENST00000553289 CYSRT1A8MQ03 144 aa8.35□□□□□ -1.07
SYNE2-208ENST00000553289 CDSNQ15517 529 aa8.35□□□□□ -1.07
SYNE2-208ENST00000553289 MRPL55Q7Z7F7 128 aaKnown RBP8.35□□□□□ -1.07
SYNE2-208ENST00000553289 PTPRSQ13332 1948 aa8.35□□□□□ -1.07
SYNE2-208ENST00000553289 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
SYNE2-208ENST00000553289 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
SYNE2-208ENST00000553289 AMELXQ99217 191 aa8.34□□□□□ -1.07
SYNE2-208ENST00000553289 PRR15LQ9BU68 103 aa8.34□□□□□ -1.07
SYNE2-208ENST00000553289 XGP55808 180 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 PRM2P04554 102 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 F8WDY8 70 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 IGHV4-30-4P0DP06 118 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 NTM-AS1Q6ZSK4 140 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 SONP18583 2426 aaKnown RBP8.33□□□□□ -1.08
SYNE2-208ENST00000553289 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
SYNE2-208ENST00000553289 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
SYNE2-208ENST00000553289 BEAN1Q3B7T3 259 aa8.32□□□□□ -1.08
SYNE2-208ENST00000553289 COL5A1P20908 1838 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-208ENST00000553289 C16orf95Q9H693 158 aa8.32□□□□□ -1.08
SYNE2-208ENST00000553289 PTPN13Q12923 2485 aa8.32□□□□□ -1.08
SYNE2-208ENST00000553289 LRCOL1A6NCL2 159 aa8.31□□□□□ -1.08
SYNE2-208ENST00000553289 K7ERS5 55 aa8.31□□□□□ -1.08
SYNE2-208ENST00000553289 Q8N814 137 aa8.3□□□□□ -1.08
SYNE2-208ENST00000553289 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
SYNE2-208ENST00000553289 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
SYNE2-208ENST00000553289 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
SYNE2-208ENST00000553289 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
SYNE2-208ENST00000553289 A0A0J9YWU9 116 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 EDN2P20800 178 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 FHL2Q14192 279 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
SYNE2-208ENST00000553289 PLA2G2AP14555 144 aa8.28□□□□□ -1.08
SYNE2-208ENST00000553289 NANOS2P60321 138 aaKnown RBP8.28□□□□□ -1.08
SYNE2-208ENST00000553289 Q8N9L7 120 aa8.28□□□□□ -1.08
SYNE2-208ENST00000553289 A0A096LNJ9 63 aa8.28□□□□□ -1.08
SYNE2-208ENST00000553289 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
SYNE2-208ENST00000553289 A0A1B0GUV1 79 aa8.28□□□□□ -1.08
SYNE2-208ENST00000553289 EML5Q05BV3 1969 aa8.27□□□□□ -1.08
SYNE2-208ENST00000553289 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.08
SYNE2-208ENST00000553289 SNURFQ9Y675 71 aa8.27□□□□□ -1.08
SYNE2-208ENST00000553289 COX6A2Q02221 97 aa8.27□□□□□ -1.09
SYNE2-208ENST00000553289 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
SYNE2-208ENST00000553289 CPAMD8Q8IZJ3 1885 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 M0QXV9 152 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 TRBV10-3A0A0K0K1G6 114 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 LINC00694P0DN24 101 aa8.26□□□□□ -1.09
SYNE2-208ENST00000553289 HIVEP3Q5T1R4 2406 aa8.25□□□□□ -1.09
SYNE2-208ENST00000553289 NUPR2A6NF83 97 aa8.25□□□□□ -1.09
SYNE2-208ENST00000553289 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
SYNE2-208ENST00000553289 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
SYNE2-208ENST00000553289 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
SYNE2-208ENST00000553289 C1orf137Q5JT78 98 aa8.24□□□□□ -1.09
SYNE2-208ENST00000553289 A0A1W2PPR1 153 aa8.23□□□□□ -1.09
SYNE2-208ENST00000553289 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
SYNE2-208ENST00000553289 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
SYNE2-208ENST00000553289 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
SYNE2-208ENST00000553289 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 A0A087WYN8 130 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 M0R2N4 97 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms