RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 IGKV3OR2-268A0A0C4DH90 116 aa13.39□□□□□ -0.27
RBFOX1-215ENST00000553186 ZNF815PA8K554 130 aa13.39□□□□□ -0.27
RBFOX1-215ENST00000553186 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
RBFOX1-215ENST00000553186 IGHV3-30-3P0DP02 117 aa13.39□□□□□ -0.27
RBFOX1-215ENST00000553186 LINC00959A0A1B0GUT2 108 aa13.38□□□□□ -0.27
RBFOX1-215ENST00000553186 H3BRM9 83 aa13.38□□□□□ -0.27
RBFOX1-215ENST00000553186 BVES-AS1Q5T3Y7 98 aa13.38□□□□□ -0.27
RBFOX1-215ENST00000553186 PLEKHB2Q96CS7 222 aa13.38□□□□□ -0.27
RBFOX1-215ENST00000553186 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-215ENST00000553186 PTTG1IPP53801 180 aa13.37□□□□□ -0.27
RBFOX1-215ENST00000553186 UBE2V1Q13404 147 aa13.37□□□□□ -0.27
RBFOX1-215ENST00000553186 ESRGQ1W209 222 aa13.37□□□□□ -0.27
RBFOX1-215ENST00000553186 LINC00269Q8N2A0 174 aa13.36□□□□□ -0.27
RBFOX1-215ENST00000553186 MEGF8Q7Z7M0 2845 aa13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 IGLV5-39A0A0G2JS06 123 aa13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 SMIM1B2RUZ4 78 aa13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 ANGP03950 147 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 CLPSL2Q6UWE3 100 aa13.35□□□□□ -0.27
RBFOX1-215ENST00000553186 HSD52Q0P140 79 aa13.34□□□□□ -0.27
RBFOX1-215ENST00000553186 TAX1BP3O14907 124 aa13.33□□□□□ -0.28
RBFOX1-215ENST00000553186 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
RBFOX1-215ENST00000553186 REG3AQ06141 175 aa13.32□□□□□ -0.28
RBFOX1-215ENST00000553186 SCGB1D4Q6XE38 83 aa13.32□□□□□ -0.28
RBFOX1-215ENST00000553186 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
RBFOX1-215ENST00000553186 SS18Q15532 418 aa13.31□□□□□ -0.28
RBFOX1-215ENST00000553186 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-215ENST00000553186 ZFAND6Q6FIF0 208 aa13.31□□□□□ -0.28
RBFOX1-215ENST00000553186 C10orf126Q8N4M7 172 aa13.31□□□□□ -0.28
RBFOX1-215ENST00000553186 CBY1Q9Y3M2 126 aa13.31□□□□□ -0.28
RBFOX1-215ENST00000553186 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-215ENST00000553186 PRR34Q9NV39 138 aa13.3□□□□□ -0.28
RBFOX1-215ENST00000553186 C21orf62-AS1Q17RA5 79 aa13.3□□□□□ -0.28
RBFOX1-215ENST00000553186 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
RBFOX1-215ENST00000553186 A0A087WZ39 114 aa13.29□□□□□ -0.28
RBFOX1-215ENST00000553186 XCL1P47992 114 aa13.29□□□□□ -0.28
RBFOX1-215ENST00000553186 KLK12Q9UKR0 248 aa13.28□□□□□ -0.28
RBFOX1-215ENST00000553186 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
RBFOX1-215ENST00000553186 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
RBFOX1-215ENST00000553186 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
RBFOX1-215ENST00000553186 VAMP3Q15836 100 aa13.27□□□□□ -0.28
RBFOX1-215ENST00000553186 TAL2Q16559 108 aa13.27□□□□□ -0.28
RBFOX1-215ENST00000553186 IGLL5B9A064 214 aa13.27□□□□□ -0.29
RBFOX1-215ENST00000553186 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
RBFOX1-215ENST00000553186 TM2D2Q9BX73 214 aa13.27□□□□□ -0.29
RBFOX1-215ENST00000553186 A0A0J9YXY3 114 aa13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 K7EP13 123 aa13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 ENHOQ6UWT2 76 aa13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 CEND1Q8N111 149 aa13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 CHCHD10Q8WYQ3 142 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
RBFOX1-215ENST00000553186 GCSHP23434 173 aa13.25□□□□□ -0.29
RBFOX1-215ENST00000553186 IGLV10-54A0A075B6I4 117 aa13.25□□□□□ -0.29
RBFOX1-215ENST00000553186 NDUFA1O15239 70 aa13.25□□□□□ -0.29
RBFOX1-215ENST00000553186 CD164L2Q6UWJ8 174 aa13.25□□□□□ -0.29
RBFOX1-215ENST00000553186 FXYD2P54710 66 aa13.24□□□□□ -0.29
RBFOX1-215ENST00000553186 SPANXB1Q9NS25 103 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-215ENST00000553186 PCP4P48539 62 aa13.24□□□□□ -0.29
RBFOX1-215ENST00000553186 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
RBFOX1-215ENST00000553186 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
RBFOX1-215ENST00000553186 ZNF625Q96I27 306 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-215ENST00000553186 LITAFQ99732 161 aa13.22□□□□□ -0.29
RBFOX1-215ENST00000553186 Q9H8V8 135 aa13.22□□□□□ -0.29
RBFOX1-215ENST00000553186 A6NDN8 102 aa13.21□□□□□ -0.29
RBFOX1-215ENST00000553186 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
RBFOX1-215ENST00000553186 LINC01561Q8N1V8 128 aa13.21□□□□□ -0.29
RBFOX1-215ENST00000553186 FOXI1Q12951 378 aa13.21□□□□□ -0.3
RBFOX1-215ENST00000553186 COX7B2Q8TF08 81 aa13.21□□□□□ -0.3
RBFOX1-215ENST00000553186 UBE2WQ96B02 151 aa13.2□□□□□ -0.3
RBFOX1-215ENST00000553186 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
RBFOX1-215ENST00000553186 COX7A2LO14548 114 aa13.19□□□□□ -0.3
RBFOX1-215ENST00000553186 CCL18P55774 89 aa13.19□□□□□ -0.3
RBFOX1-215ENST00000553186 CRPP02741 224 aa13.18□□□□□ -0.3
RBFOX1-215ENST00000553186 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
RBFOX1-215ENST00000553186 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
RBFOX1-215ENST00000553186 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
RBFOX1-215ENST00000553186 ADAMTSL4-AS1Q5T5F5 129 aa13.17□□□□□ -0.3
RBFOX1-215ENST00000553186 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
RBFOX1-215ENST00000553186 MIAQ16674 131 aa13.17□□□□□ -0.3
RBFOX1-215ENST00000553186 TIMM17BO60830 172 aa13.15□□□□□ -0.3
RBFOX1-215ENST00000553186 HERV-K104P63124 156 aa13.15□□□□□ -0.3
RBFOX1-215ENST00000553186 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
RBFOX1-215ENST00000553186 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
RBFOX1-215ENST00000553186 KRTAP26-1Q6PEX3 210 aa13.14□□□□□ -0.31
RBFOX1-215ENST00000553186 Q8IZM0 81 aa13.14□□□□□ -0.31
RBFOX1-215ENST00000553186 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-215ENST00000553186 DYNC2H1Q8NCM8 4307 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 SPANXCQ9NY87 97 aa13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 MALP21145 153 aa13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
RBFOX1-215ENST00000553186 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
RBFOX1-215ENST00000553186 C6orf226Q5I0X4 101 aa13.12□□□□□ -0.31
RBFOX1-215ENST00000553186 A0A1B0GWB2 263 aa13.11□□□□□ -0.31
RBFOX1-215ENST00000553186 C9orf118A6NHY6 69 aa13.11□□□□□ -0.31
RBFOX1-215ENST00000553186 K7ERJ3 54 aa13.11□□□□□ -0.31
RBFOX1-215ENST00000553186 MUSTN1Q8IVN3 82 aa13.11□□□□□ -0.31
RBFOX1-215ENST00000553186 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-215ENST00000553186 SMIM13P0DJ93 91 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms