RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DEFB113Q30KQ7 82 aa5.38□□□□□ -1.55
BEST3-212ENST00000553096 LITAFQ99732 161 aa5.38□□□□□ -1.55
BEST3-212ENST00000553096 OPRPNQ99935 248 aaPredicted RBP5.38□□□□□ -1.55
BEST3-212ENST00000553096 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
BEST3-212ENST00000553096 ZNF580Q9UK33 172 aa5.38□□□□□ -1.55
BEST3-212ENST00000553096 ACYP1P07311 99 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 MUC4Q99102 2169 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 H7C423 109 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 LST1O00453 97 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 PRSS2P07478 247 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 NIPBLQ6KC79 2804 aaeCLIP5.37□□□□□ -1.55
BEST3-212ENST00000553096 COX7CP15954 63 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 PRIMA1Q86XR5 153 aa5.37□□□□□ -1.55
BEST3-212ENST00000553096 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 Q6YL49 198 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 TMEM61Q8N0U2 210 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 NF1P21359 2839 aa5.36□□□□□ -1.55
BEST3-212ENST00000553096 SETD2Q9BYW2 2564 aaPredicted RBP5.36□□□□□ -1.55
BEST3-212ENST00000553096 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
BEST3-212ENST00000553096 CIRBPQ14011 172 aaKnown RBP5.35□□□□□ -1.55
BEST3-212ENST00000553096 C16orf95Q9H693 158 aa5.35□□□□□ -1.55
BEST3-212ENST00000553096 K7EQG2 157 aa5.35□□□□□ -1.55
BEST3-212ENST00000553096 SMR3AQ99954 134 aa5.35□□□□□ -1.55
BEST3-212ENST00000553096 TLN2Q9Y4G6 2542 aa5.34□□□□□ -1.55
BEST3-212ENST00000553096 TRAV12-2A0A075B6T6 113 aa5.34□□□□□ -1.55
BEST3-212ENST00000553096 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
BEST3-212ENST00000553096 Q9UF83 564 aa5.34□□□□□ -1.55
BEST3-212ENST00000553096 TRAV8-3A0A0A6YYJ7 113 aa5.34□□□□□ -1.56
BEST3-212ENST00000553096 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.56
BEST3-212ENST00000553096 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
BEST3-212ENST00000553096 NDUFA1O15239 70 aa5.33□□□□□ -1.56
BEST3-212ENST00000553096 SPINK13Q1W4C9 94 aa5.33□□□□□ -1.56
BEST3-212ENST00000553096 CLEC2BQ92478 149 aa5.33□□□□□ -1.56
BEST3-212ENST00000553096 UBE2D4Q9Y2X8 147 aa5.33□□□□□ -1.56
BEST3-212ENST00000553096 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
BEST3-212ENST00000553096 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
BEST3-212ENST00000553096 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
BEST3-212ENST00000553096 NDUFC2O95298 119 aa5.32□□□□□ -1.56
BEST3-212ENST00000553096 ATP5G1P05496 136 aa5.32□□□□□ -1.56
BEST3-212ENST00000553096 COX7A2LO14548 114 aa5.31□□□□□ -1.56
BEST3-212ENST00000553096 CHCHD7Q9BUK0 85 aa5.31□□□□□ -1.56
BEST3-212ENST00000553096 DEFB136Q30KP8 78 aa5.31□□□□□ -1.56
BEST3-212ENST00000553096 SYNJ2BPP57105 145 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 HILS1P60008 231 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 Q8N2B8 174 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 UBE2E2Q96LR5 201 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 SORL1Q92673 2214 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
BEST3-212ENST00000553096 SONP18583 2426 aaKnown RBP5.3□□□□□ -1.56
BEST3-212ENST00000553096 A8MTW9 85 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 SLURP1P55000 103 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 NPC2P61916 151 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
BEST3-212ENST00000553096 KRTAP1-1Q07627 177 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 LINC00467Q9BRT7 94 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 NACAE9PAV3 2078 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 IGHV3-73A0A0B4J1V6 119 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 IGHV3-53P01767 116 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 CXCL5P42830 114 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
BEST3-212ENST00000553096 FAM222AQ5U5X8 452 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
BEST3-212ENST00000553096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
BEST3-212ENST00000553096 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
BEST3-212ENST00000553096 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
BEST3-212ENST00000553096 C11orf44Q8N8P7 122 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 DAND5Q8N907 189 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 CDKN2A-AS1Q9UH64 79 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 NSD1Q96L73 2696 aaPredicted RBP5.28□□□□□ -1.56
BEST3-212ENST00000553096 Q6ZSV7 163 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 ESM1Q9NQ30 184 aa5.28□□□□□ -1.56
BEST3-212ENST00000553096 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 LY6G6DO95868 133 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 SS18Q15532 418 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 Q9H8V8 135 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 PAX4O43316 350 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 PROK1P58294 105 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 MRPL55Q7Z7F7 128 aaKnown RBP5.27□□□□□ -1.57
BEST3-212ENST00000553096 RBMY1A1P0DJD3 496 aaKnown RBP5.27□□□□□ -1.57
BEST3-212ENST00000553096 RBMY1CP0DJD4 496 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 RBMY1FQ15415 496 aaKnown RBP5.27□□□□□ -1.57
BEST3-212ENST00000553096 BEAN1Q3B7T3 259 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 C1orf158Q8N1D5 194 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
BEST3-212ENST00000553096 JMJD1CQ15652 2540 aa5.26□□□□□ -1.57
BEST3-212ENST00000553096 HIVEP2P31629 2446 aa5.26□□□□□ -1.57
BEST3-212ENST00000553096 DNAJC9-AS1A6NH13 148 aa5.26□□□□□ -1.57
BEST3-212ENST00000553096 HTN1P15515 57 aa5.26□□□□□ -1.57
BEST3-212ENST00000553096 DAZ2Q13117 558 aaKnown RBP5.26□□□□□ -1.57
BEST3-212ENST00000553096 DAZ4Q86SG3 579 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms