RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
TRAFD1-209ENST00000552896 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 COX7A2LO14548 114 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 C2orf88Q9BSF0 95 aa7.6□□□□□ -1.19
TRAFD1-209ENST00000552896 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 LINC01620Q4KN68 170 aa7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 LINC00173Q6ZV60 143 aa7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 C9orf163Q8N9P6 203 aa7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 AMELXQ99217 191 aa7.59□□□□□ -1.19
TRAFD1-209ENST00000552896 MALP21145 153 aa7.58□□□□□ -1.2
TRAFD1-209ENST00000552896 XGP55808 180 aa7.58□□□□□ -1.2
TRAFD1-209ENST00000552896 ERASQ7Z444 233 aa7.58□□□□□ -1.2
TRAFD1-209ENST00000552896 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
TRAFD1-209ENST00000552896 UBE2D1P51668 147 aa7.57□□□□□ -1.2
TRAFD1-209ENST00000552896 VCX2Q9H322 139 aa7.57□□□□□ -1.2
TRAFD1-209ENST00000552896 PCLOQ9Y6V0 5065 aa7.57□□□□□ -1.2
TRAFD1-209ENST00000552896 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 APOMO95445 188 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 SLPIP03973 132 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 RAB5BP61020 215 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 FAM19A3Q7Z5A8 133 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 OR10D4PQ8NGN7 298 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 URB1-AS1Q96HZ7 61 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 FAM30AQ9NZY2 134 aa7.56□□□□□ -1.2
TRAFD1-209ENST00000552896 A0A096LNJ9 63 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 LINC00614P0C842 121 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 Q8N1X5 172 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
TRAFD1-209ENST00000552896 A0A087WZ39 114 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 HBDP02042 147 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 SEC11AP67812 179 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 PKIGQ9Y2B9 76 aa7.54□□□□□ -1.2
TRAFD1-209ENST00000552896 COLCA2A8K830 154 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 HERVK_113P63121 156 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 HAMPP81172 84 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 CHCHD1Q96BP2 118 aaKnown RBP7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 C2orf48Q96LS8 159 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 VPS13BQ7Z7G8 4022 aa7.53□□□□□ -1.2
TRAFD1-209ENST00000552896 IGLV4-69A0A075B6H9 119 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 TRGC2P03986 189 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 COX6A2Q02221 97 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 SYCNQ0VAF6 134 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 FAT1Q14517 4588 aa7.52□□□□□ -1.21
TRAFD1-209ENST00000552896 F8WDY8 70 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 PMVKQ15126 192 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
TRAFD1-209ENST00000552896 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
TRAFD1-209ENST00000552896 GEMIN7Q9H840 131 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-209ENST00000552896 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 SCO1O75880 301 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 ATP5LO75964 103 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 Q6ZRU5 148 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
TRAFD1-209ENST00000552896 EPM2AB3EWF7 344 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 PANO1I0J062 215 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 NDUFA1O15239 70 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 RNF151Q2KHN1 245 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 Q5VSD8 79 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
TRAFD1-209ENST00000552896 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 HSBP1O75506 76 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 KIAA0087Q14695 138 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 LINC00474Q9P2X8 69 aa7.47□□□□□ -1.21
TRAFD1-209ENST00000552896 A0A096LNI7 61 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 SERF1AO75920 110 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms