RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 COX6A2Q02221 97 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 CSPG4Q6UVK1 2322 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 LINC00308Q8TCZ7 52 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 XCL2Q9UBD3 114 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 Q9UF83 564 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 SORL1Q92673 2214 aa4.25□□□□□ -1.73
CHMP4A-210ENST00000552620 CCL24O00175 119 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 SNCGO76070 127 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 ACYP1P07311 99 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 C16orf74Q96GX8 76 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 OVOL2Q9BRP0 275 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 Q9H8V8 135 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 NACAE9PAV3 2078 aa4.24□□□□□ -1.73
CHMP4A-210ENST00000552620 TRAV13-2A0A0B4J235 113 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 TRBV6-4A0A1B0GX49 114 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 COX7A2LO14548 114 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 UBE2L6O14933 153 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 TRACP01848 142 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 ZNF625Q96I27 306 aaPredicted RBP4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 C16orf95Q9H693 158 aa4.23□□□□□ -1.73
CHMP4A-210ENST00000552620 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 F5H768 121 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 LINC00694P0DN24 101 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 KRTAP10-9P60411 292 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 GAGE5Q13069 117 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 TTC32Q5I0X7 151 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 FAM222AQ5U5X8 452 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 Q6ZTI0 123 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 RELNP78509 3460 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 CR1P17927 2039 aa4.22□□□□□ -1.73
CHMP4A-210ENST00000552620 DOPEY1Q5JWR5 2465 aa4.21□□□□□ -1.73
CHMP4A-210ENST00000552620 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 NPC2P61916 151 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 ZNF843Q8N446 348 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 C15orf53Q8NAA6 179 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 NOP10Q9NPE3 64 aaKnown RBP4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 SPG11Q96JI7 2443 aa4.21□□□□□ -1.74
CHMP4A-210ENST00000552620 TRGV2A0A075B6R0 118 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 TRAV26-1A0A087WT03 109 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 IGLV1-51P01701 117 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 GIG44P09565 113 aaPredicted RBP4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 NDUFV3P56181 108 aaKnown RBP4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 GAGE6Q13070 117 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 DAND5Q8N907 189 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
CHMP4A-210ENST00000552620 TRGV4A0A0C4DH28 118 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 PLAC8L1A1L4L8 177 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 IBA57-AS1B1ANH7 110 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 H0YGX0 51 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 CSNK1G2-AS1Q8NCQ2 148 aa4.19□□□□□ -1.74
CHMP4A-210ENST00000552620 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 A0A087WZ39 114 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 CRLF1O75462 422 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 NDUFA7O95182 113 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 PRB1P04280 392 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 BAALC-AS2P0C853 105 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 INAFM2P0DMQ5 153 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 KIR2DL5BQ8NHK3 375 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 LINC01006Q8NI28 216 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 ESM1Q9NQ30 184 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 SPTBN4Q9H254 2564 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 NCOR2Q9Y618 2525 aa4.18□□□□□ -1.74
CHMP4A-210ENST00000552620 IGHV3OR16-9A0A0B4J2B5 98 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 A0A0U1RRA0 63 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 CRPP02741 224 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 LINC00158P58513 81 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 MIR7-3HGQ8N6C7 128 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 LINC00612Q8N6U2 182 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 CREBBPQ92793 2442 aa4.17□□□□□ -1.74
CHMP4A-210ENST00000552620 A0A1B0GUV1 79 aa4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 SMIM9A6NGZ8 99 aa4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 RPL35AP18077 110 aaKnown RBP4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 SDIM1Q6ZPB5 146 aa4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 WFDC11Q8NEX6 87 aa4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
CHMP4A-210ENST00000552620 ITPR1Q14643 2758 aa4.15□□□□□ -1.74
CHMP4A-210ENST00000552620 PKD1L2Q7Z442 2459 aa4.15□□□□□ -1.74
CHMP4A-210ENST00000552620 IGLV4-60A0A075B6I1 120 aa4.15□□□□□ -1.75
CHMP4A-210ENST00000552620 LOC100131303A0A0U1RQF7 123 aa4.15□□□□□ -1.75
CHMP4A-210ENST00000552620 LINC00959A0A1B0GUT2 108 aa4.15□□□□□ -1.75
CHMP4A-210ENST00000552620 DNAL4O96015 105 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms