RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 CCL25O15444 150 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 KRTAP10-1P60331 282 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 Q8N3U1 123 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 RMI2Q96E14 147 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
SMARCC2-212ENST00000552566 TRAV13-1A0A0B4J241 112 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 TRAV8-4A0A0B4J246 113 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 PSCAO43653 123 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 XGP55808 180 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 KRTDAPP60985 99 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 SEC11AP67812 179 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 MIAQ16674 131 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
SMARCC2-212ENST00000552566 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
SMARCC2-212ENST00000552566 AMELXQ99217 191 aa9.29□□□□□ -0.92
SMARCC2-212ENST00000552566 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
SMARCC2-212ENST00000552566 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 C20orf202A1L168 122 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 GCSHP23434 173 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 Q9HAA7 133 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 PRR34Q9NV39 138 aa9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
SMARCC2-212ENST00000552566 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 GEMIN7Q9H840 131 aaKnown RBP9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
SMARCC2-212ENST00000552566 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 AKR1D1P51857 326 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 Q5VSD8 79 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 OR10D4PQ8NGN7 298 aa9.26□□□□□ -0.93
SMARCC2-212ENST00000552566 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
SMARCC2-212ENST00000552566 UBE2D1P51668 147 aa9.25□□□□□ -0.93
SMARCC2-212ENST00000552566 HAMPP81172 84 aa9.25□□□□□ -0.93
SMARCC2-212ENST00000552566 FAM104AQ969W3 186 aa9.25□□□□□ -0.93
SMARCC2-212ENST00000552566 F8VRH5 84 aa9.24□□□□□ -0.93
SMARCC2-212ENST00000552566 XCL1P47992 114 aa9.24□□□□□ -0.93
SMARCC2-212ENST00000552566 HERVK_113P63121 156 aa9.24□□□□□ -0.93
SMARCC2-212ENST00000552566 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
SMARCC2-212ENST00000552566 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
SMARCC2-212ENST00000552566 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
SMARCC2-212ENST00000552566 PLNP26678 52 aa9.23□□□□□ -0.93
SMARCC2-212ENST00000552566 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
SMARCC2-212ENST00000552566 FAT1Q14517 4588 aa9.23□□□□□ -0.93
SMARCC2-212ENST00000552566 GAGE12HA6NDE8 117 aa9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 H3BRM9 83 aa9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 DPM2O94777 84 aa9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 SCGB1D1O95968 90 aa9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 ODF1Q14990 250 aa9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 MRPL35Q9NZE8 188 aaKnown RBP9.22□□□□□ -0.93
SMARCC2-212ENST00000552566 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 MALP21145 153 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
SMARCC2-212ENST00000552566 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 COX7A2LO14548 114 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 IGKCP01834 107 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 Q8N814 137 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 PMCHL2Q9BQD1 86 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 HERC1Q15751 4861 aa9.2□□□□□ -0.94
SMARCC2-212ENST00000552566 APOMO95445 188 aa9.19□□□□□ -0.94
SMARCC2-212ENST00000552566 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
SMARCC2-212ENST00000552566 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
SMARCC2-212ENST00000552566 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
SMARCC2-212ENST00000552566 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
SMARCC2-212ENST00000552566 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 LECT2O14960 151 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 HERVK_113P61574 105 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 COX6A2Q02221 97 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 FOXI1Q12951 378 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
SMARCC2-212ENST00000552566 IGHV3OR16-9A0A0B4J2B5 98 aa9.16□□□□□ -0.94
SMARCC2-212ENST00000552566 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
SMARCC2-212ENST00000552566 FAM30AQ9NZY2 134 aa9.16□□□□□ -0.94
SMARCC2-212ENST00000552566 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
SMARCC2-212ENST00000552566 A0A087WZ39 114 aa9.15□□□□□ -0.94
SMARCC2-212ENST00000552566 WFDC2Q14508 124 aa9.15□□□□□ -0.94
SMARCC2-212ENST00000552566 JOSD1Q15040 202 aaPredicted RBP9.15□□□□□ -0.94
SMARCC2-212ENST00000552566 LINC01561Q8N1V8 128 aa9.15□□□□□ -0.94
SMARCC2-212ENST00000552566 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
SMARCC2-212ENST00000552566 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
SMARCC2-212ENST00000552566 PRSS2P07478 247 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms