RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 MT1HP80294 61 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 QRFPP83859 136 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 PRCDQ00LT1 54 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 LINC01556Q5JQF7 62 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 SPINK6Q6UWN8 80 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 CLVS1Q8IUQ0 354 aaPredicted RBP2.01□□□□□ -2.09
LIMA1-208ENST00000551691 LSM10Q969L4 123 aaKnown RBP2.01□□□□□ -2.09
LIMA1-208ENST00000551691 LPAR5Q9H1C0 372 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 CKLFQ9UBR5 152 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 SS18L2Q9UHA2 77 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 PRNDQ9UKY0 176 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 H7C2G1 150 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 EDF1O60869 148 aaKnown RBP2□□□□□ -2.09
LIMA1-208ENST00000551691 IGKV4-1P06312 121 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 CD2P06729 351 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 SFTA3P0C7M3 94 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 SRIP30626 198 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 G6PCP35575 357 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 ETV6P41212 452 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 PIGPP57054 158 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 NDUFA5Q16718 116 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 TDRG1Q3Y452 100 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 LCE1CQ5T751 118 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 MIR17HGQ75NE6 70 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 ACBD7Q8N6N7 88 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 TMEM263Q8WUH6 116 aaKnown RBP2□□□□□ -2.09
LIMA1-208ENST00000551691 MRPL32Q9BYC8 188 aaKnown RBP2□□□□□ -2.09
LIMA1-208ENST00000551691 OSTCQ9NRP0 149 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 PRO0255Q9UI72 69 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 PSORS1C2Q9UIG4 136 aa2□□□□□ -2.09
LIMA1-208ENST00000551691 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 TRBV19A0A075B6N1 114 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 PNMA8CA0A1B0GUJ8 204 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 TSTD3H0UI37 97 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 S100GP29377 79 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 ZNF90Q03938 601 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 KHDC3LQ587J8 217 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 HIST3H2BBQ8N257 126 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 C9orf163Q8N9P6 203 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 MBD3L1Q8WWY6 194 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 PYDC1Q8WXC3 89 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 SH3BGRL3Q9H299 93 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 BATF3Q9NR55 127 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 RPRMQ9NS64 109 aa1.99□□□□□ -2.09
LIMA1-208ENST00000551691 IGHV3-64A0A075B6Q5 118 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 TRAV7A0A075B6U4 112 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 TRAV12-3A0A0B4J271 114 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 TRGV4A0A0C4DH28 118 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 DUXBA0A1W2PPF3 345 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 H7BYZ3 331 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 J3QQQ9 107 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 TCL1BO95988 128 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 FAM107AO95990 144 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 IGKV1-5P01602 117 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 HIST1H1AQ02539 215 aaPredicted RBP1.98□□□□□ -2.09
LIMA1-208ENST00000551691 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 TMEM203Q969S6 136 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 ZC2HC1AQ96GY0 325 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 RETNLBQ9BQ08 111 aa1.98□□□□□ -2.09
LIMA1-208ENST00000551691 KMT2DO14686 5537 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 MAP1LC3B2A6NCE7 125 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 HMSDA8MTL9 139 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 GPR31O00270 319 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 ZNF73O43830 326 aaPredicted RBP1.97□□□□□ -2.09
LIMA1-208ENST00000551691 SPINK4O60575 86 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 SNAPC5O75971 98 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 METTL15P1P0C7V9 234 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 IGLC1P0CG04 106 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 FXYD2P54710 66 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 CIRBPQ14011 172 aaKnown RBP1.97□□□□□ -2.09
LIMA1-208ENST00000551691 ZNF846Q147U1 533 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 LCA10Q71F78 164 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 ATP6V0E2Q8NHE4 81 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 CANT1Q8WVQ1 401 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 MAP1LC3BQ9GZQ8 125 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 PLAC8Q9NZF1 115 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 LAMTOR3Q9UHA4 124 aa1.97□□□□□ -2.09
LIMA1-208ENST00000551691 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.09
LIMA1-208ENST00000551691 TRAV4A0A0B4J268 109 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 TRGC1P0CF51 173 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 CRYGAP11844 174 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 ZNF80P51504 273 aaPredicted RBP1.96□□□□□ -2.1
LIMA1-208ENST00000551691 ZNF818PQ6ZRF7 136 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 DHFR2Q86XF0 187 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 DEFB107AQ8IZN7 70 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 OR8I2Q8N0Y5 310 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 C12orf45Q8N5I9 185 aaPredicted RBP1.96□□□□□ -2.1
LIMA1-208ENST00000551691 OR5A1Q8NGJ0 315 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 TERB2Q8NHR7 220 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 C20orf166-AS1Q96NR2 134 aa1.96□□□□□ -2.1
LIMA1-208ENST00000551691 HIST1H2BLQ99880 126 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms